DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6a13 and Cyp12c1

DIOPT Version :9

Sequence 1:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster


Alignment Length:497 Identity:127/497 - (25%)
Similarity:219/497 - (44%) Gaps:97/497 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 FRGNMSG-----LGRDLHWTDINLRIYRK-FRGVERYCGYFTFMTKSLFIMDLELIRDIMIRDFS 97
            |||...|     ||.|    |: :|:|:| |..:....|.|. |..::|..::|....: .|...
  Fly    53 FRGFQKGGEYHQLGMD----DV-MRLYKKQFGDICLIPGLFG-MPSTVFTFNVETFEKV-YRTEG 110

  Fly    98 SFADRG------LFHNVRDDPLTGNL--LFLDGPEWRWLRQNLTQVFTSGK-MKFMFPNMVEVGE 153
            .:..||      .:.|.|.|....|.  ||.:|.||...|..:..|....: :......|..|..
  Fly   111 QWPVRGGAEPVIHYRNKRKDEFFKNCMGLFGNGAEWGKNRSAVNPVLMQHRNVAIYLKPMQRVNR 175

  Fly   154 KLTQACRLQVGEIEAKDLCARF-------TTDVIGSCAFGLECNSLQD--PESQFRRMGRSVTQE 209
            :.....| ::.:.|::::...|       |.:.:.:.|...|...|::  |..:..::.:::   
  Fly   176 QFVNRIR-EIRDKESQEVPGDFMNTINHLTFESVATVALDRELGLLREANPPPEASKLFKNI--- 236

  Fly   210 PLHSVLVQAF--MFAQPELARKL---RFRLFRPEVSEFFLDT----VRQTLDYRRRE------NI 259
               .||:.:|  :..:|.|.|.:   .::.|...:.|.| ||    |.|.::...|:      |.
  Fly   237 ---EVLMDSFFDLGVRPSLYRYIPTPTYKKFSRAMDEIF-DTCSMYVNQAIERIDRKSSQGDSND 297

  Fly   260 HRNDLIQLLMELGEEGVKDALSFEQIAAQALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVE 324
            |::.|.|||.          :..:.....|:...:.|.||:||.:|..|..||.||:.|:|||.|
  Fly   298 HKSVLEQLLQ----------IDRKLAVVMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREE 352

  Fly   325 VLAVLKRNNQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKE-----YQIPNSNLILEPG 384
            ||:.|...:.:.|.:.::.:|||..|:.|:||.||:.....|.:..:     |:||.       |
  Fly   353 VLSKLTSLHSEFTVEDMKSLPYLRAVIKESLRLYPVTFGNARSAGADVVLDGYRIPK-------G 410

  Fly   385 SKIIIPVHSIHHDPELYPDPEKFDPSRF------EPEEI---KARHPFAYLPFGEGPRNCIGERF 440
            :|:::....:..|..|||..::|.|.|:      :..::   |..:.|.|||||.|||.|:|:|.
  Fly   411 TKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRI 475

  Fly   441 GKLQVKVGLVYLLRDFKFSRSEKTQ------------IPLKF 470
            ..|::::.:..|:|:|....:..|:            |||||
  Fly   476 VDLEMELTVANLVRNFHIEYNYSTEKPYKCRFLYKPNIPLKF 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a13NP_610390.1 p450 33..476 CDD:278495 127/497 (26%)
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 122/480 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.