DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a13 and Cyp4f4

DIOPT Version :10

Sequence 1:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_775146.1 Gene:Cyp4f4 / 286904 RGDID:708363 Length:522 Species:Rattus norvegicus


Alignment Length:465 Identity:126/465 - (27%)
Similarity:216/465 - (46%) Gaps:77/465 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GYFTFMTKSLFIMDL---ELIRDIMIRDFSSFADRGLFHNVRDDPLTGNLLFLDGPEWRWLRQNL 132
            |:.|::...|.|:.|   ::||.::....|......:|::.....|...||..||.:|...|:.|
  Rat    87 GFMTWLGPILPIITLCHPDVIRSVLSASASVALKEVIFYSFLKPWLGDGLLLSDGDKWSCHRRML 151

  Fly   133 TQVFTSGKMK---FMFPNMVEVGEKLTQ------ACRLQVGEIEAKDLCARFTTDVIGSCAFGLE 188
            |..|....:|   .:|.:...:.....|      :.||.:    .|:: :..|.|.:..|.|..:
  Rat   152 TPAFHFNILKPYVKIFNDSTNIMHAKWQDLASGGSARLDM----FKNI-SLMTLDSLQKCVFSFD 211

  Fly   189 CNSLQDPESQFRRMGRSVTQEPLHSVLVQAFMFAQPELARKLRFRLFRPE--------------- 238
            .|..:.|                 |..:.|.:.....:|::.:..|...:               
  Rat   212 SNCQEKP-----------------SEYISAILELSALVAKRYQQLLLHTDSLYQLTHNGRRFHKA 259

  Fly   239 --VSEFFLDTVRQTLDYRRR--ENIHRNDLIQ-------------LLMELGEEGVKDALSFEQIA 286
              :...|.|.|.|.   |||  .:.|.:|:::             ||:...|:|.:  ||.|.|.
  Rat   260 CKLVHNFTDAVIQG---RRRALPSQHEDDILKAKARSKTLDFIDVLLLTKDEDGKE--LSDEDIR 319

  Fly   287 AQALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEVLAVLK-RNNQKLTYDSVQEMPYLDQV 350
            |:|..|...|.||:::.:|:.||.||.:|:.|||.|.||..:|: |.:.::.:|.:.::|:|...
  Rat   320 AEADTFMFEGHDTTASGLSWILYNLARHPEYQERCRQEVRELLRDRESTEIEWDDLAQLPFLTMC 384

  Fly   351 VAETLRKYPILPHLLRRSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDPSRFEPE 415
            :.|:||.:|.:..:.||.|::..:|:.. ::..|...||.:.:.||:|.::||||.:||.||:||
  Rat   385 IKESLRLHPPVTVISRRCTQDIVLPDGR-VIPKGVICIINIFATHHNPTVWPDPEVYDPFRFDPE 448

  Fly   416 EIKARHPFAYLPFGEGPRNCIGERFGKLQVKVGLVYLLRDFKFSRSEKTQIPLKFSSRNFLISTQ 480
            .||.|.|.|::||..|||||||:.|...::||.|...|..|:....:|.  |.:  ....::..:
  Rat   449 NIKDRSPLAFIPFSAGPRNCIGQTFAMNEMKVALALTLLRFRVLPDDKE--PRR--KPELILRAE 509

  Fly   481 EGVHLRMEGL 490
            .|:.||:|.|
  Rat   510 GGLWLRVEPL 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a13NP_610390.1 CYP6-like 67..484 CDD:410679 122/457 (27%)
Cyp4f4NP_775146.1 CYP4F 74..515 CDD:410772 122/459 (27%)

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