DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6a13 and Cyp3a2

DIOPT Version :9

Sequence 1:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_695224.3 Gene:Cyp3a2 / 266682 RGDID:708379 Length:504 Species:Rattus norvegicus


Alignment Length:511 Identity:173/511 - (33%)
Similarity:284/511 - (55%) Gaps:48/511 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LTL--LVLVFTVGLLLYVKLRWH-YSYWSRRGVAGERPVYFRGNM----SGLGRDLHWTDINLRI 59
            |||  .||:..:.:||| :|..| :..:.::|:.|.:|:.|.|.:    .||||      .::..
  Rat     7 LTLETWVLLAVILVLLY-RLGTHRHGIFKKQGIPGPKPLPFLGTVLNYYKGLGR------FDMEC 64

  Fly    60 YRKFRGVERYCGYFTFMTKSLFIMDLELIRDIMIRD-FSSFADRGLFHNVRDDPLTGNLLFL-DG 122
            |:|:   .:..|.|...|....|||.|:|::::::: ||.|.:|..|..|   .:.|..:.: ..
  Rat    65 YKKY---GKIWGLFDGQTPVFAIMDTEMIKNVLVKECFSVFTNRRDFGPV---GIMGKAVSVAKD 123

  Fly   123 PEWRWLRQNLTQVFTSGKMKFMFPNMVEVGEKLTQACR--LQVGE-IEAKDLCARFTTDVIGSCA 184
            .||:..|..|:..||||::|.|||.:.:.|:.|.:..:  .:.|: :..|.:...::.|||.|.:
  Rat   124 EEWKRYRALLSPTFTSGRLKEMFPIIEQYGDILVKYLKQEAETGKPVTMKKVFGAYSMDVITSTS 188

  Fly   185 FGLECNSLQDPESQF----RRMGRSVTQEPLHSVLVQAFMFAQPELARKLRFRLFRPEVSEF--- 242
            ||:..:||.:|:..|    :::.|....:||. :.|..|.|..| :...|...:|..:...|   
  Rat   189 FGVNVDSLNNPKDPFVEKTKKLLRFDFFDPLF-LSVVLFPFLTP-IYEMLNICMFPKDSIAFFQK 251

  Fly   243 FLDTVRQT-LDYRRRENIHRNDLIQLLMELGEEGVKD-----ALSFEQIAAQALVFFLAGFDTSS 301
            |:..:::| ||.:.:   ||.|.:||::. .....||     |||..:|.||:::|..||::|:|
  Rat   252 FVHRIKETRLDSKHK---HRVDFLQLMLN-AHNNSKDEVSHKALSDVEIIAQSVIFIFAGYETTS 312

  Fly   302 TTMSFCLYELALNPDVQERLRVEVLAVLKRNNQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLR 366
            :|:||.||.||.:||:|::|:.|:...|. :....|||.|.||.|||.|:.||||.|||...|.|
  Rat   313 STLSFVLYFLATHPDIQKKLQEEIDGALP-SKAPPTYDIVMEMEYLDMVLNETLRLYPIGNRLER 376

  Fly   367 RSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDPSRFEPEEIKARHPFAYLPFGEG 431
            ...|:.::  ..|.:..||.:.||.:::||||:.:|.||:|.|.||..|...:..|:.|||||.|
  Rat   377 VCKKDIEL--DGLFIPKGSVVTIPTYALHHDPQHWPKPEEFHPERFSKENKGSIDPYVYLPFGNG 439

  Fly   432 PRNCIGERFGKLQVKVGLVYLLRDFKFSRSEKTQIPLKFSSRNFLISTQEGVHLRM 487
            ||||||.||..:.:|:.|..:|::|.|...::||||||. ||..::..::.:.|::
  Rat   440 PRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQIPLKL-SRQAILEPEKPIVLKV 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a13NP_610390.1 p450 33..476 CDD:278495 161/464 (35%)
Cyp3a2NP_695224.3 CYP3A 67..493 CDD:410743 152/441 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 256 1.000 Domainoid score I1960
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm8924
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

Return to query results.
Submit another query.