DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a13 and cyp-13A3

DIOPT Version :9

Sequence 1:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_496110.1 Gene:cyp-13A3 / 188359 WormBaseID:WBGene00011675 Length:520 Species:Caenorhabditis elegans


Alignment Length:554 Identity:133/554 - (24%)
Similarity:238/554 - (42%) Gaps:113/554 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVLVFTVGLLLYVKLRWHYSYWSRRGVAGERPVYFRGNMSG-----------LGRDLHWTDINL 57
            |:.:...:|:..|  ..|.:|:|.|:|:.|.|.:.|.|.::.           ||   .||....
 Worm     6 LIAIALFIGVFTY--YLWIWSFWMRKGIKGPRGLPFFGIINAFQSYEKPWILRLG---DWTKEYG 65

  Fly    58 RIYRKFRGVERYCGYFTFMTKSLFIMDLELIRDIMIRDFSSFADRGLFHNVRDDPLTG------- 115
            .:|....|||          |:|.:.|.|.:.::.::.|.:|..|      :.:||.|       
 Worm    66 PMYGFTDGVE----------KTLVVSDPEFVHEVFVKQFDNFYAR------KQNPLQGDPDKDPR 114

  Fly   116 -NLLFLDGPEWRWLRQNLTQVFTSGKMKFMFPNMVE-VGEKLTQACRLQVG--EIEAKDLCARFT 176
             :|:...|..|:.||...:..|::..::.:|..:.| |.|.:....:...|  .|:..:....||
 Worm   115 IHLVTSQGHRWKRLRTLASPTFSNKSLRKIFSTVEESVAEMMRHLEKGTAGGKTIDILEYYQEFT 179

  Fly   177 TDVIGSCAFG---------------------------LECNSLQDPESQFRRMGRSVTQEPLHSV 214
            .|:||..|.|                           :.|..:....|.||.....|......:.
 Worm   180 MDIIGKIAMGQSGSMMFENPWLDKIRAIFNTRGNIIFIICGIVPFTGSIFRWFFSKVPTAQTVTS 244

  Fly   215 LVQAFMFAQPELARKLRFRLFRPEVS-----------EFFLDTVRQT--LDYRRRENIHRNDLIQ 266
            |:.....|   |.:::..|....:..           :.|||....|  |:...:....|:.:::
 Worm   245 LMHTLEIA---LTKRVEQRAADEKAGIESSGEPQDFIDLFLDVQADTDFLEDETKNGFARSQIVK 306

  Fly   267 LLMELGEEGVKDALSFEQIAAQALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEVLAVLKR 331
                     |...|:|::|..|..||.|||:||::.::|:..|.||.:|::|::|:.||    .|
 Worm   307 ---------VDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEV----DR 358

  Fly   332 N--NQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKEYQIPNSNLIL----EPGSKIIIP 390
            .  :.::|:|.:.::.|::.|:.||||.||:...:..|...:     |..:|    |.|:.:...
 Worm   359 ECPDPEVTFDQLSKLKYMECVIKETLRLYPLASIVHNRKCMK-----STTVLGMKIEEGTNVQAD 418

  Fly   391 VHSIHHDPELY-PDPEKFDPSRFEPEEIKARHPFAYLPFGEGPRNCIGERFGKLQVKVGLVYLLR 454
            ..::|:||:.: .:..:|.|.|:|..:.:|....||||||.|||.|||.|...::.|:.|..:|:
 Worm   419 TWTLHYDPKFWGENANEFKPERWESGDEQAVAKGAYLPFGLGPRICIGMRLAYMEEKMLLAQILK 483

  Fly   455 DFKFSRSEKTQIPLKFSSRNFLISTQEGVHLRME 488
            .:....:.:|.||||..  ....:....|||:::
 Worm   484 KYSLETTFETHIPLKLV--GIATTAPTNVHLKLK 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a13NP_610390.1 p450 33..476 CDD:278495 122/511 (24%)
cyp-13A3NP_496110.1 p450 33..512 CDD:278495 123/520 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 171 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H134304
Inparanoid 1 1.050 180 1.000 Inparanoid score I2666
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm4759
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.780

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