DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a13 and cyp-13A4

DIOPT Version :9

Sequence 1:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_496111.1 Gene:cyp-13A4 / 188355 WormBaseID:WBGene00011671 Length:520 Species:Caenorhabditis elegans


Alignment Length:553 Identity:142/553 - (25%)
Similarity:249/553 - (45%) Gaps:120/553 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LTLLVL-VFTVGLLLYVKLRWHYSYWSRRGVAGERPVYFRG--------NMSGLGRDLHWTDINL 57
            |:||:. ...:|.|.|  ..|.:|:|.|:||.|.|...|.|        ...||.:...||....
 Worm     3 LSLLIAGALFIGFLTY--YIWIWSFWIRKGVKGPRGFPFFGVILKFHDYENPGLLKLGEWTKKYG 65

  Fly    58 RIYRKFRGVERYCGYFTFMTKSLFIMDLELIRDIMIRDFSSFADRGLFHNVRDDPLTG------- 115
            .||....|||          |:|.:.:.|.:.::.::.|.:|..|      :.:|:.|       
 Worm    66 SIYGITEGVE----------KTLVVSNPEFVHEVFVKQFDNFYGR------KTNPIQGDPNKNKR 114

  Fly   116 -NLLFLDGPEWRWLRQNLTQVFTSGKMKFMFPNMVEVGEKLTQACRLQVGEIEAK-------DLC 172
             :|:...|..|:.||...:..|::..::.:   |..|.|.:.:..| .:.|..||       |..
 Worm   115 AHLVLAQGHRWKRLRTLASPTFSNKSLRKI---MSTVEETVVELMR-HLDEASAKGKAVDLLDYY 175

  Fly   173 ARFTTDVIGSCAFG-LECNSLQDP-----ESQFRRMGRSVTQEPLHSVLVQAFMFAQPELARKL- 230
            ..||.|:||..|.| .|....::|     :..|::.|:      :..::...|..| ..|.|:| 
 Worm   176 QEFTLDIIGRIAMGQTESLMFRNPMLPKVKEIFKKGGK------MPFLIAGVFPIA-GTLMRQLF 233

  Fly   231 -RFRLFRPEVSEFFLDTVRQTLDYRRRENI-----------HRNDLIQLLME-------LGEEG- 275
             :|..|.|...  .::|:.:.|:.|..:..           ...|.|.|.::       :.||. 
 Worm   234 MKFPKFSPAFG--IMNTMEKALNKRLEQRAADKKAGIEPSGEPQDFIDLFLDARANVDFIEEEST 296

  Fly   276 ----------VKDALSFEQIAAQALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEVLAVLK 330
                      |...|:|::|..|..||.|||:||::.::|:..|.||.:|::|::|:.||    .
 Worm   297 LGFAKSEVLKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEV----D 357

  Fly   331 RN--NQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKEYQIPNSNLI---LEPGSKIIIP 390
            |.  :.::|:|.:.::.|::.||.|.||.||:...:..|..    :..:|::   ::.|:.:.:.
 Worm   358 RECPDPEVTFDQISKLKYMECVVKEALRMYPLASLVHNRKC----MKKTNVLGVEIDEGTNVQVD 418

  Fly   391 VHSIHHDPELYPDPEKFDPSRFEPEEIKARHPF-----AYLPFGEGPRNCIGERFGKLQVKVGLV 450
            ..::|:||:::.|    |.|.|:||..:.....     .|||||.|||.|||.|...::.|:.|.
 Worm   419 TWTLHYDPKVWGD----DASEFKPERWETGDELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLT 479

  Fly   451 YLLRDFKFSRSEKTQIPLK------FSSRNFLI 477
            ::|:.:.|..|.:|:||||      .:.||.::
 Worm   480 HILKKYTFDTSTETEIPLKLVGSATIAPRNVML 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a13NP_610390.1 p450 33..476 CDD:278495 130/518 (25%)
cyp-13A4NP_496111.1 p450 33..514 CDD:278495 130/521 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 171 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H134304
Inparanoid 1 1.050 180 1.000 Inparanoid score I2666
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm4759
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.780

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