DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a13 and Cyp26a1

DIOPT Version :10

Sequence 1:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_569092.2 Gene:Cyp26a1 / 154985 RGDID:620161 Length:497 Species:Rattus norvegicus


Alignment Length:468 Identity:102/468 - (21%)
Similarity:166/468 - (35%) Gaps:158/468 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 GKMKFMF----PNMVEVGEKLTQACRLQVGEIEAKDLCARFTTDVIGS----------------- 182
            |.|.|.|    ..||....|..|..|.:.|.|....|..|.|..|:|:                 
  Rat    47 GTMGFPFFGETLQMVLQRRKFLQMKRRKYGFIYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVH 111

  Fly   183 ------CAFGLEC-NSLQDPESQFRRMGRSVTQEPLHSVLVQAF--------------------- 219
                  ...|..| ::|.|...:.|:           .|::|||                     
  Rat   112 WPASVRTILGAGCLSNLHDSSHKQRK-----------KVIMQAFNREALQCYVPVIAEEVSGCLE 165

  Fly   220 ---------MFAQPELARKLRFRL-------------------------FRPEVSEFF---LDT- 246
                     :...||: ::|.||:                         |.......|   :|. 
  Rat   166 QWLSCGERGLLVYPEV-KRLMFRIAMRILLGCEPGPAGGGEDEQQLVEAFEEMTRNLFSLPIDVP 229

  Fly   247 ---------VRQTLDYRRRENIHRNDLIQLLMELGEEGVKDALSF---------EQIAAQAL--- 290
                     .|..:..|..||| |..:.:|.....:.|.||||..         |::..|||   
  Rat   230 FSGLYRGVKARNLIHARIEENI-RAKIRRLQAAEPDAGCKDALQLLIEHSWERGERLDMQALKQS 293

  Fly   291 --VFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEV----LAVLKRNNQKLTYDSVQEMPYLDQ 349
              .....|.:|:::..:..:..|.|.|.|.:::|.|:    |.....:..||..::::::.|:..
  Rat   294 STELLFGGHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKSHHEDKLDMETLEQLKYIGC 358

  Fly   350 VVAETLRKYPILPHLLRRSTKE-----YQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDP 409
            |:.||||..|.:|...|.:.|.     ||||.       |..:|..:...|...:.:.:.|:|:|
  Rat   359 VIKETLRLNPPVPGGFRVALKTFELNGYQIPK-------GWNVIYSICDTHDVADSFTNKEEFNP 416

  Fly   410 SRF---EPEEIKARHPFAYLPFGEGPRNCIGERFGKLQVKVGLVYLLR--DFKFSRSEKT----- 464
            .||   .||:...   |:::|||.|.|:|:|:.|.|:.:|:..|.|.|  |::......|     
  Rat   417 DRFTSLHPEDTSR---FSFIPFGGGLRSCVGKEFAKILLKIFTVELARRCDWQLLNGPPTMKTSP 478

  Fly   465 ------QIPLKFS 471
                  .:|.:|:
  Rat   479 PVYPVDNLPARFT 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a13NP_610390.1 CYP6-like 67..484 CDD:410679 102/468 (22%)
Cyp26a1NP_569092.2 cytochrome_P450 55..490 CDD:477761 97/457 (21%)

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