DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12780 and XTH28

DIOPT Version :9

Sequence 1:NP_610388.1 Gene:CG12780 / 35834 FlyBaseID:FBgn0033301 Length:100 Species:Drosophila melanogaster
Sequence 2:NP_172925.1 Gene:XTH28 / 838037 AraportID:AT1G14720 Length:332 Species:Arabidopsis thaliana


Alignment Length:25 Identity:10/25 - (40%)
Similarity:12/25 - (48%) Gaps:3/25 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RVTSSERRGFEVSIDDEPGISLFGF 34
            |:|..||.|.....:|   |.|.||
plant    54 RLTLDERTGSGFVSND---IYLHGF 75

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12780NP_610388.1 CBM39 6..97 CDD:292510 10/25 (40%)
XTH28NP_172925.1 GH16_XET 29..290 CDD:185685 10/25 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209387at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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