DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12780 and XTH25

DIOPT Version :9

Sequence 1:NP_610388.1 Gene:CG12780 / 35834 FlyBaseID:FBgn0033301 Length:100 Species:Drosophila melanogaster
Sequence 2:NP_568859.2 Gene:XTH25 / 835859 AraportID:AT5G57550 Length:284 Species:Arabidopsis thaliana


Alignment Length:27 Identity:8/27 - (29%)
Similarity:13/27 - (48%) Gaps:6/27 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GRLNEPIVDLGNQTWAA---DIIGKDK 59
            ||.:.|   .|:..|.:   |:..:||
plant   231 GRSSCP---AGSPRWFSQRLDLTAEDK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12780NP_610388.1 CBM39 6..97 CDD:292510 8/27 (30%)
XTH25NP_568859.2 GH16_XET 27..282 CDD:185685 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209387at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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