DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtt and olfcn1

DIOPT Version :10

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:XP_073785910.1 Gene:olfcn1 / 793310 ZFINID:ZDB-GENE-061117-2 Length:1188 Species:Danio rerio


Alignment Length:812 Identity:236/812 - (29%)
Similarity:396/812 - (48%) Gaps:80/812 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   424 LEAMLFTIDRINR-EQLLPNITLGAHILDDCDKDSYGLEMAVDFIKGSISNIDDAEYHCNKTQVR 487
            :::|:|.:|.||: |:|||:|:||..|:|.|...:..|......    :|...:.|:   .:|..
Zfish   410 IQSMMFAVDEINKNEELLPHISLGYKIMDSCASPTNVLRAVFSL----VSEQKEQEF---TSQCH 467

  Fly   488 KVISGVVGAASSVTSIQVANLLRLFRIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQVKAMVEI 552
            ..::.:|..:.|..|:.||.:|..||:|.||||||...||:::::..|.||||||.||.||:..:
Zfish   468 LPLTALVAESGSSQSLAVAGMLGPFRVPMVSYFSTCACLSDRKKYPSFFRTIPSDFYQAKALASL 532

  Fly   553 VKRMGWSYVSIIYEESNY---GIKAF-EELEELLARHNICIAIKEKLVK---DSGVAEDIAYDNI 610
            ||:.||:::..:..:::|   ||.|| :|:|::    .:|||....:::   .|.:.|       
Zfish   533 VKQFGWTWIGALQSDNDYGRNGISAFTKEVEKM----GVCIAFVGTILRTYPQSKITE------- 586

  Fly   611 VQKLLTKPRARGAIIFGSDQEVRQVMRAVRRANATGSFSWIGSDGW--SARNLVSDDYEPEVEGT 673
            |.:::.:...:..:.|..:.::..:|:.|...|.|| ..||.|:.|  :||....:.:: ...||
Zfish   587 VVEMIKESTVKVILAFVPEGDLYPLMKEVVNRNITG-IQWIASEAWVTAARPSTPEMFK-SFGGT 649

  Fly   674 LSVQPQANPVRGFEEYFLSLTVENNQRNPWFVEFWEDHFQCRYPGSTSTPYNNYT---KQCTTKE 735
            :....:...:.....|..:::..:..::.:..:|||....|: |.....|..|.|   :.||.:|
Zfish   650 VGFVVRKMAMLKLRPYLENISPYSPTQSAFVSDFWETVVGCK-PCLNCEPSANSTLNGQMCTGQE 713

  Fly   736 RLSRQNTD-FEDQLQF-----VSDAVMAFAYALRDMHRDL-CGGGPSLCE------AMKPTKGAD 787
            :|:  .|| |.|..|.     |..||.|.|:|:   |:.| |.|..:|.:      .:.|.:.:|
Zfish   714 KLT--FTDKFFDVTQVRVTYNVYQAVYAIAHAI---HKVLYCQGDNNLSKMCLNVSQITPKQVSD 773

  Fly   788 LLKYLRKVEFEGLSGDEFRFDGNGDGPARYNIIHFKQSQAGQYHWVKVGEYT---EGELRLNMTE 849
               .|.:|.|....|:...||.|||.||.|.:|:::.:| |:...|.||.::   :|..:|.:.|
Zfish   774 ---QLERVNFIDEYGENVFFDENGDPPASYELINWQLNQ-GEVQHVTVGYFSKSPDGTYKLTIKE 834

  Fly   850 VKF----KRLSPKPPESVCSLPCLVGQAKKYVEGES-CCWHCFNCTTYQIRHPDDETHCKLCKLG 909
            ...    :.|.||   :|||..|..|..|..::|.. ||:.|..|....|.:......|.||...
Zfish   835 DNVHWSTENLIPK---AVCSDTCPKGTRKAQIKGRPVCCFDCIPCADGSISNTTGAADCTLCPKE 896

  Fly   910 TLPDAHKQYCRPIPEIYLRPESAWAIGAMAFSATGILVTLFVMGVFVRHNDTPIVRASGRELSYI 974
            ...:..:..|......:|.......|...|.|..|..:|:..|.||:.:.:||||:|:..|||.:
Zfish   897 YWSNERRDKCLVKTIEFLSYTETMGIILTALSLFGASLTVATMIVFIHYRETPIVKANNSELSSL 961

  Fly   975 LLAGIFMCYGVTFALVLKPTNIVCAIQRFGVGFCFTVVYAALLTKTNRIARIFKAGKQSAKRPSF 1039
            ||:.:|.|:......:.:||:..|.::....|..|.:..:.:|.||..:...|:|.....|....
Zfish   962 LLSSLFFCFLCPLTFIGEPTHWSCMLRHTAFGLTFALCISCVLGKTIVVVTAFRATLPGNKLSGK 1026

  Fly  1040 ISPKSQLVICACLVSVQILINGVWMVIAPSHAMHHYP---TREDN---LLVCDSYIDASYMIAFS 1098
            ..|..|..|.....::||:|..:|::|.|.     :|   .|.|:   :|.|::..||.:..|..
Zfish  1027 FGPVQQRAIVFLCTAIQIVICALWLLIKPP-----FPDKALRYDHKKIILECNTGSDAGFYAALG 1086

  Fly  1099 YPIFLIVICTVYAVLTRKIPEAFNESKHIGFTMYTTCVIWLAFVPLYFGTANHVPLRITSMSVTI 1163
            |...|..||.:.|.|.||:|:.|||:|.|.|:|...|.:|:.|:|.|..:.....:.:...:  |
Zfish  1087 YVGLLSTICLILAFLGRKLPDNFNEAKFISFSMLIFCAVWVTFIPAYISSPGKYTVAVEIFA--I 1149

  Fly  1164 SLSASVTIACLFSPKLYIILIRPERNVRQSMM 1195
            ..||...:.|:|:||.:||||:||||.|:.:|
Zfish  1150 LSSAFGLLLCIFAPKCFIILIKPERNTRKHVM 1181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_type1 73..>157 CDD:471960
PBP1_mGluR 393..848 CDD:380585 129/452 (29%)
NCD3G 860..912 CDD:462210 15/52 (29%)
7tmC_mGluRs 932..1184 CDD:320173 78/257 (30%)
TM helix 1 932..957 CDD:320173 8/24 (33%)
TM helix 2 969..990 CDD:320173 7/20 (35%)
TM helix 3 999..1023 CDD:320173 5/23 (22%)
TM helix 4 1045..1065 CDD:320173 6/19 (32%)
TM helix 5 1089..1115 CDD:320173 9/25 (36%)
TM helix 6 1123..1146 CDD:320173 9/22 (41%)
TM helix 7 1153..1178 CDD:320173 5/24 (21%)
olfcn1XP_073785910.1 None
Blue background indicates that the domain is not in the aligned region.

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