DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtt and grm8b

DIOPT Version :9

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:NP_001274468.1 Gene:grm8b / 569768 ZFINID:ZDB-GENE-110421-3 Length:907 Species:Danio rerio


Alignment Length:933 Identity:385/933 - (41%)
Similarity:551/933 - (59%) Gaps:78/933 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 LRSLPDSVSFQNDRLYATQPQRHWPVKREAIVEGDVILGGLMMVHSR-EDSITCGPIMPQGGIQA 423
            |..:..|:|.:.|.|....|:....::    ::||:|||||..||:| |....||.:..:.||..
Zfish    14 LTGVTRSISQRTDPLTPPAPEYAHSIR----LDGDIILGGLFPVHARGERGAPCGELKKEKGIHR 74

  Fly   424 LEAMLFTIDRINRE-QLLPNITLGAHILDDCDKDSYGLEMAVDFIKGSISNIDDAEYHCNK---- 483
            ||||||.||.||:: .||||:||||.|||.|.:|:|.||.::.|::..|.. |..:..|..    
Zfish    75 LEAMLFAIDLINKDPDLLPNVTLGARILDTCSRDTYALEQSLTFVQALIER-DSTDVRCASGEQP 138

  Fly   484 --TQVRKVISGVVGAASSVTSIQVANLLRLFRIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQV 546
              .:..|:| ||:|||:|..||.|||:||||:|||:||.||:||||:..|:::|||.:|.|.||.
Zfish   139 IFAKPDKII-GVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 202

  Fly   547 KAMVEIVKRMGWSYVSIIYEESNY---GIKAFEELEELLARHNICIAIKEKLVKDSGVAEDIAYD 608
            :||::||..|||:|||.:..|.||   |::||.::..  ....:|||...|:.::....|   :|
Zfish   203 QAMLDIVTAMGWNYVSTLASEGNYGESGVEAFVQISR--ETGGVCIAQSLKIPREPRPGE---FD 262

  Fly   609 NIVQKLLTKPRARGAIIFGSDQEVRQVMRAVRRANATGSFSWIGSDGWSARNLVSDDYEPEVEGT 673
            .|:.:||..|.||..::|.::.::|:|:.|.:|.|.||.|.|:|||.|.::.......|...||.
Zfish   263 KIILRLLETPSARAIVMFANEDDIRRVLDAAKRNNQTGHFLWVGSDSWGSKISPVVQQESVAEGA 327

  Fly   674 LSVQPQANPVRGFEEYFLSLTVENNQRNPWFVEFWEDHFQCRY------PGSTSTPYNNYTKQCT 732
            :::.|:...:..|:.||.|.::.||:||.||.||||::|.|:.      |||        .::||
Zfish   328 ITILPKRASIEAFDRYFKSRSLSNNRRNVWFAEFWEENFGCKLGMHGKRPGS--------PRKCT 384

  Fly   733 TKERLSRQNT-DFEDQLQFVSDAVMAFAYALRDMHRDLCGGGPSLCEAMKPTKGADLLKYLRKVE 796
            ..|::.|.:| :.|.::|||.|||.|.|:||..||||||.|.|.||..|....|.:||.|:|.|.
Zfish   385 GLEKVGRDSTYEQEGKVQFVMDAVYAMAHALHRMHRDLCSGYPGLCPRMSNIDGKELLGYIRNVS 449

  Fly   797 FEGLSGDEFRFDGNGDGPARYNIIHFKQSQAGQYHWVKVGEYTEGELRLNMTEVKFKRLSPKPPE 861
            |.|.:.....|:.|||.|.||:|..::.:.....:.: :|.:|: :|.||:..:::.......|.
Zfish   450 FNGSAKTLVVFNENGDAPGRYDIYQYQITNKSTEYRI-IGHWTD-QLHLNINAMQWASGDDVMPT 512

  Fly   862 SVCSLPCLVGQAKKYVEGESCCWHCFNCTTYQIRHPDDETHCKLCKLGTLPDAHKQYCRPIPEIY 926
            |||||||.:|:.||.|:|..|||||..|..|  .:...|..|::|.....||.::..|:|||.|.
Zfish   513 SVCSLPCQMGERKKIVKGVPCCWHCERCEGY--HYQASEFTCQICPYELRPDQNRTGCQPIPIIK 575

  Fly   927 LRPESAWAIGAMAFSATGILVTLFVMGVFVRHNDTPIVRASGRELSYILLAGIFMCYGVTFALVL 991
            |...|.||:..:..:..|||.|.||:..|||:||||||||||||:||:||.|||:||.:||.::.
Zfish   576 LEWHSPWAVVPVFIAILGILATTFVVVTFVRYNDTPIVRASGREMSYVLLTGIFLCYVITFPMIG 640

  Fly   992 KPTNIVCAIQR--FGVGFCFTVVYAALLTKTNRIARIFKAGKQSAKRPSFISPKSQLVICACLVS 1054
            .|...||:.:|  .|:|.||:  |||||||||||.|||:.||.|...|.||||.|||||...|:|
Zfish   641 APGVAVCSFRRIFLGLGMCFS--YAALLTKTNRIHRIFEQGKCSVAAPRFISPASQLVITFSLIS 703

  Fly  1055 VQILINGVWMVIAPSHAMHHY-------PTREDNLLVCDSYIDASYMIAFSYPIFLIVICTVYAV 1112
            ||::...||.|:.|.|.:..|       |.....:|.|| ..|.|.:.:..|.|.|:|.|||||:
Zfish   704 VQLMGVFVWFVVDPPHTVVDYGEQRTQDPKNARGVLKCD-ISDLSLICSLGYSILLMVTCTVYAI 767

  Fly  1113 LTRKIPEAFNESKHIGFTMYTTCVIWLAFVPLYFGTA---NHVPLRITSMSVTISLSASVTIACL 1174
            .||.:||.|||:|.|||||||||:|||||:|::||||   ..:.::..:::|::||||||::..|
Zfish   768 KTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSEERMYIQTATLTVSLSLSASVSLGML 832

  Fly  1175 FSPKLYIILIRPERNVRQSMMPPRYGNMHRTAGTGPSSMMAAAVVTAATCAQEEKIQKHITPTNT 1239
            :.||:|||::.||:||     |.|..:.             .|:|||||...:   ...:.....
Zfish   833 YMPKVYIIILHPEQNV-----PKRKRSF-------------KAIVTAATMTNK---LSQLASERP 876

  Fly  1240 ENSLKTKKLCEMATQTISSIITS 1262
            ...:|| :|||....:..|..|:
Zfish   877 NGEVKT-ELCESVDNSAPSTKTT 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_Type_1 73..>152 CDD:299141
PBP1_mGluR 393..847 CDD:107357 193/471 (41%)
ANF_receptor 422..820 CDD:279440 173/414 (42%)
NCD3G 861..910 CDD:284890 22/48 (46%)
7tm_3 945..1181 CDD:278433 128/247 (52%)
grm8bNP_001274468.1 Periplasmic_Binding_Protein_Type_1 43..503 CDD:299141 194/476 (41%)
ANF_receptor 73..477 CDD:279440 174/418 (42%)
NCD3G 512..558 CDD:284890 22/47 (47%)
7tm_3 594..839 CDD:278433 128/247 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I9765
eggNOG 1 0.900 - - E33208_3B9DN
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H654
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000883
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100392
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.710

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