DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtt and grm6b

DIOPT Version :9

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:NP_001073489.1 Gene:grm6b / 565450 ZFINID:ZDB-GENE-021120-2 Length:905 Species:Danio rerio


Alignment Length:854 Identity:361/854 - (42%)
Similarity:529/854 - (61%) Gaps:51/854 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 PDSVSFQNDRLYATQPQRHWPVKREAIVEGDVILGGLMMVHSREDS-ITCGPIMPQGGIQALEAM 427
            |:|.:..:|    |||.   .:|    :|||:.||||..||||..: |.||.:..:.||..:|||
Zfish    40 PESQAASSD----TQPH---SIK----IEGDITLGGLFPVHSRGPAGIPCGEVKKEKGIHRMEAM 93

  Fly   428 LFTIDRINRE-QLLPNITLGAHILDDCDKDSYGLEMAVDFIKGSISNIDDAEYHCNKTQVRKV-- 489
            |:.:|:||.: .|||||||||.|||.|.:|:|.||.::.|::..|.. |:::..|:..:...:  
Zfish    94 LYALDQINSDPDLLPNITLGARILDTCSRDTYALEQSLTFVQALIQK-DNSDVRCSNGEPPIIPK 157

  Fly   490 ---ISGVVGAASSVTSIQVANLLRLFRIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQVKAMVE 551
               :.||:||::|..||.|||:||||.|||:||.||:||||:..|:::|||.:|.|.:|.:|||:
Zfish   158 PERVVGVIGASASSVSIMVANVLRLFAIPQISYASTAPELSDNNRYDFFSRVVPPDSFQAQAMVD 222

  Fly   552 IVKRMGWSYVSIIYEESNY---GIKAFEELEELLARHNICIAIKEKLVKDSGVAEDIAYDNIVQK 613
            |||.|||:|||.:..|.||   |:.||.::..  ....:|||...|:.::....|   :|.|:::
Zfish   223 IVKAMGWNYVSTLASEGNYGESGVDAFIQISR--EAGGLCIAQAIKIPREPRPGE---FDKIIKR 282

  Fly   614 LLTKPRARGAIIFGSDQEVRQVMRAVRRANATGSFSWIGSDGWSARNLVSDDYEPEVEGTLSVQP 678
            |:....|||.|||.::.::::|:.|.:|||.||.|.::|||.|.|:.....:.|...||.:::.|
Zfish   283 LMETSNARGVIIFANEDDIKRVLEAAKRANLTGHFLFVGSDSWGAKISPILNQEDVAEGAVTILP 347

  Fly   679 QANPVRGFEEYFLSLTVENNQRNPWFVEFWEDHFQCRY--PGSTSTPYNNYTKQCTTKERLSRQN 741
            :...:.||::||.:.::|||:||.||.|||||.|:|:.  ||...   :...::||.:||:.|.:
Zfish   348 KRASIEGFDQYFTTRSLENNRRNIWFAEFWEDDFKCKLTRPGIRG---DGGLRKCTGEERIGRDS 409

  Fly   742 -TDFEDQLQFVSDAVMAFAYALRDMHRDLCGGGPSLCEAMKPTKGADLLKYLRKVEFEGLSGDEF 805
             .:.|.::|||.|||.|.|:||..||.|||.|...:|:.|.|..|..||.|:|.|.|.|.:|...
Zfish   410 GYEQEGKVQFVIDAVYAMAHALHSMHIDLCPGSMGVCDKMDPVDGRMLLTYIRAVNFNGSAGTGV 474

  Fly   806 RFDGNGDGPARYNIIHFKQSQAGQYHWVKVGEYTEGELRLNMTEVKFKRLSPKPPESVCSLPCLV 870
            .|:.|||.|.||:|..::.|......:..:|::| ..|||:..::::.......|:||||.||..
Zfish   475 MFNENGDAPGRYDIFQYQLSNTTNPGYKLIGQWT-NHLRLSAEDMQWSGGEKLVPDSVCSFPCES 538

  Fly   871 GQAKKYVEGESCCWHCFNCTTYQIRHPDDETHCKLCKLGTLPDAHKQYCRPIPEIYLRPESAWAI 935
            |:.|:.|:|..|||||..|..||...  ||.:|.:|.....|..::..|||.|.|.|...|.|||
Zfish   539 GERKRMVKGVPCCWHCELCDGYQFLL--DEFNCDMCPFDMRPTPNRTACRPTPIIKLEWSSPWAI 601

  Fly   936 GAMAFSATGILVTLFVMGVFVRHNDTPIVRASGRELSYILLAGIFMCYGVTFALVLKPTNIVCAI 1000
            ..:..:..|||.|..|:..|:|.|||||||||||||||:||.|||:.|.:||.::.:|..:|||.
Zfish   602 IPVFLAVLGILATTGVIATFIRFNDTPIVRASGRELSYVLLTGIFLIYLITFLMIAEPGTVVCAF 666

  Fly  1001 QR--FGVGFCFTVVYAALLTKTNRIARIFKAGKQSAKRPSFISPKSQLVICACLVSVQILINGVW 1063
            :|  .|:|.|  :.|:|:|||||||.|||:.||:|...|.||||.|||:|...|:|||:|...:|
Zfish   667 RRLLLGLGMC--ISYSAMLTKTNRIYRIFEQGKKSVTPPKFISPTSQLIITFILISVQLLGIFIW 729

  Fly  1064 MVIAPSHAMHHY-------PTREDNLLVCDSYIDASYMIAFSYPIFLIVICTVYAVLTRKIPEAF 1121
            ..:.|.|....:       |.....:|.|| ..|.|.:...||.:.|:|.|||||:.:|.:||.|
Zfish   730 FGVVPPHTNVDFDELRPPNPEFARGILKCD-MSDLSLIGCLSYSMGLMVTCTVYAIKSRGVPETF 793

  Fly  1122 NESKHIGFTMYTTCVIWLAFVPLYFGTANHVP---LRITSMSVTISLSASVTIACLFSPKLYIIL 1183
            ||:|.|||||||||:|||||||::|||:....   ::.|:::|::||||:|::..|:.||:|:|:
Zfish   794 NEAKPIGFTMYTTCIIWLAFVPIFFGTSQSTEKMFIQTTTLTVSMSLSATVSLGMLYIPKVYVII 858

  Fly  1184 IRPERNVRQ 1192
            ..||:||::
Zfish   859 FHPEQNVQK 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_Type_1 73..>152 CDD:299141
PBP1_mGluR 393..847 CDD:107357 192/466 (41%)
ANF_receptor 422..820 CDD:279440 170/409 (42%)
NCD3G 861..910 CDD:284890 22/48 (46%)
7tm_3 945..1181 CDD:278433 120/247 (49%)
grm6bNP_001073489.1 PBP1_mGluR_groupIII 58..520 CDD:107371 192/471 (41%)
ANF_receptor 88..492 CDD:279440 171/412 (42%)
NCD3G 530..576 CDD:284890 22/47 (47%)
7tm_3 611..856 CDD:278433 120/247 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I9765
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000883
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100392
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X509
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.810

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