DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtt and grm3

DIOPT Version :9

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:NP_001121815.1 Gene:grm3 / 565256 ZFINID:ZDB-GENE-061009-13 Length:884 Species:Danio rerio


Alignment Length:896 Identity:369/896 - (41%)
Similarity:536/896 - (59%) Gaps:57/896 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 KREAIVEGDVILGGLMMVHSREDSI-TCGPIMPQGGIQALEAMLFTIDRINRE-QLLPNITLGAH 448
            ::|..::||::||||..:|.:...: .||.|....|||.||||||.||:||:: .|||.:.||.|
Zfish    24 RKEIKIDGDLVLGGLFPIHEKGMGMDECGRINEDRGIQRLEAMLFAIDQINQDVALLPGVVLGVH 88

  Fly   449 ILDDCDKDSYGLEMAVDFIKGSISNIDDAEYHCN------KTQVRKVISGVVGAASSVTSIQVAN 507
            |||.|.:|:|.||.|::|::.|::.:||.|:.|.      :......|:||:|.:.|..||||||
Zfish    89 ILDTCSRDTYALEQALEFVRASLTKVDDTEFICPDGSYALQEDSPLAIAGVIGGSFSSVSIQVAN 153

  Fly   508 LLRLFRIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQVKAMVEIVKRMGWSYVSIIYEESNYGI 572
            |||||:|||:||.|||.:||:|.|::||:||:|.|.||.|||.||::...|:|||.:..|.:||.
Zfish   154 LLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRAFNWTYVSTVASEGDYGE 218

  Fly   573 KAFEELEELLARHNICIAIKEKLVKDSGVAEDIAYDNIVQKLLTKPRARGAIIFGSDQEVRQVMR 637
            ...|..|:.....|||||..||:.:.|  |:..:|:.:|::||.||.||.|::|....:.|:::.
Zfish   219 TGIEAFEQQARLRNICIATSEKVGRSS--AKRSSYEAVVRQLLQKPTARVAVLFLRSDDARELIA 281

  Fly   638 AVRRANATGSFSWIGSDGWSARNLVSDDYEPEVEGTLSVQPQANPVRGFEEYFLSLTVENNQRNP 702
            |..|.||  ||.|:.||||.|:..:....|...:|.::::..|:|:..|..||.:||.:.|.|||
Zfish   282 AAARLNA--SFLWVASDGWGAQESIVKGNEFTADGAITLELAAHPIPDFNRYFQTLTPQINHRNP 344

  Fly   703 WFVEFWEDHFQCRYPGSTSTPYNNYTKQCTTKERLSRQNTDFEDQLQFVSDAVMAFAYALRDMHR 767
            ||.:|||..|||...|:::|........|..:..:.:.|.:.|.::.||.:||.|.|:||..|.|
Zfish   345 WFKDFWEQKFQCSLGGTSATGAGTPKPPCDQELVIDKSNFEPESKIMFVVNAVYAMAHALHRMQR 409

  Fly   768 DLCGGGPSLCEAMKPTKGADLLK-YLRKVEFE------GLSGDEFRFDGNGDGPARYNIIHFKQS 825
            .||.....||:||:...|..|.: :|..|.|.      ||. .:.:||..|||..||||.:: ||
Zfish   410 TLCANTTRLCDAMRSLDGRKLYRDFLLHVNFRAPFSPAGLE-SQVKFDAYGDGVGRYNIFNY-QS 472

  Fly   826 QAG--QYHWVKVGEYTEGELRLNMTEVKFKRLSPKPPESVCSLPCLVGQAKKYVEGESCCWHCFN 888
            ..|  ::.:|:|||:.| .|.||...:.:.| ....|.|.||.||...:.||...||.|||.|..
Zfish   473 VPGSDKFAYVQVGEWAE-SLSLNEGLIGWPR-GADVPTSQCSDPCAPNEMKKMQAGEYCCWICTP 535

  Fly   889 CTTYQIRHPDDETHCKLCKLGTLPDAHKQYCRPIPEIYLRPESAWAIGAMAFSATGILVTLFVMG 953
            |..|:  :..||..|..|..|..|......|..:||.|:..|.|||||.::.:..|.:.||.|..
Zfish   536 CEPYE--YLPDEFTCMPCAPGQWPRPDLTGCYDLPEDYIMWEDAWAIGPISIACVGFICTLMVFI 598

  Fly   954 VFVRHNDTPIVRASGRELSYILLAGIFMCYGVTFALVLKPTNIVCAIQRFGVGFCFTVVYAALLT 1018
            ||:||||||:|:||||||.||||.|:||.|.:||..:.||:.|||.::|.|:|..|.|.|:||||
Zfish   599 VFIRHNDTPLVKASGRELCYILLLGVFMSYVMTFIFIAKPSPIVCTLRRLGLGTSFAVCYSALLT 663

  Fly  1019 KTNRIARIFKAGKQ-SAKRPSFISPKSQLVICACLVSVQILINGVWMVI-APSHAMHHYPTREDN 1081
            |||||||||...|: .|:||.||||.||:.||..|:|||:|:..||::: .|.......|.:...
Zfish   664 KTNRIARIFSGVKEGGAQRPRFISPSSQVFICLSLISVQLLLVSVWLLVEVPGTRRFTTPEKRQT 728

  Fly  1082 LLVCDSYIDASYMIAFSYPIFLIVICTVYAVLTRKIPEAFNESKHIGFTMYTTCVIWLAFVPLYF 1146
            :::..:..|:|.:::.||.:.|:|:|||||..|||.||.|||:|.|||||||||:|||||:|:::
Zfish   729 VILKCNVRDSSMLMSLSYDVVLVVLCTVYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFY 793

  Fly  1147 GTANHVPLRITSMSVTISLSASVTIACLFSPKLYIILIRPERNVRQSMMPPRYGNMHRTAGTGPS 1211
            .|::...::.|:|.:::|||..|.:.|:|:||::||:.:|::||....:     ||:|.:.:|| 
Zfish   794 VTSSDYRVQTTTMCISVSLSGFVVLGCMFAPKVHIIMFQPQKNVTSHRL-----NMNRFSVSGP- 852

  Fly  1212 SMMAAAVVTAATCAQEEKIQKHITPTNTENSLKTKKLC---EMATQTISSI 1259
                     |.:.|....:..|..||          :|   |:...|.||:
Zfish   853 ---------ATSYASHASVSAHYVPT----------VCNGREIVDSTTSSL 884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_Type_1 73..>152 CDD:299141
PBP1_mGluR 393..847 CDD:107357 194/470 (41%)
ANF_receptor 422..820 CDD:279440 171/411 (42%)
NCD3G 861..910 CDD:284890 19/48 (40%)
7tm_3 945..1181 CDD:278433 119/237 (50%)
grm3NP_001121815.1 PBP1_mGluR_groupII 31..493 CDD:107370 193/468 (41%)
ANF_receptor 61..471 CDD:279440 172/415 (41%)
NCD3G 508..556 CDD:284890 20/49 (41%)
7tm_3 590..828 CDD:278433 119/237 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9DN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1154468at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100392
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.720

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