DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtt and grm2b

DIOPT Version :9

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:NP_001274476.1 Gene:grm2b / 564461 ZFINID:ZDB-GENE-060201-5 Length:874 Species:Danio rerio


Alignment Length:894 Identity:363/894 - (40%)
Similarity:524/894 - (58%) Gaps:64/894 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 TQPQRHWPV---KREAIVEGDVILGGLMMVHSR----EDSITCGPIMPQGGIQALEAMLFTIDRI 434
            |.|:...|:   |||.|::||:::|||..||.:    ||   ||.|..:.|||.|||||..:|.|
Zfish    18 TTPRYAPPLAGSKREIIIDGDLVIGGLFPVHEKGKGTED---CGKINEERGIQRLEAMLLALDEI 79

  Fly   435 NRE-QLLPNITLGAHILDDCDKDSYGLEMAVDFIKGSISNIDDAEYHCN------KTQVRKVISG 492
            |:: ::||.:.|||||||.|.||:|.||.::.|::.|::.:....:.|.      ..::...|||
Zfish    80 NQDNRILPGLKLGAHILDTCSKDTYALEQSLAFVRASLTKVHQPGFICPDGSNPVPDELPLAISG 144

  Fly   493 VVGAASSVTSIQVANLLRLFRIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQVKAMVEIVKRMG 557
            |:|.:.|..|||||||||||:|||:||.|||.:||:|.|::||:||:|.|.||.||:.||::...
Zfish   145 VIGGSYSDVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAIAEILRYFN 209

  Fly   558 WSYVSIIYEESNYGIKAFEELEELLARHNICIAIKEKLVKDSGVAEDIAYDNIVQKLLTKPRARG 622
            |:|||.:..|.:||....:..::......||||..   ||.|.......|:.:::.|..|..|:.
Zfish   210 WTYVSTVASEGDYGETGIDAFQQEARVRQICIATS---VKVSRSVNQGNYETVIRSLQQKANAKV 271

  Fly   623 AIIFGSDQEVRQVMRAVRRANATGSFSWIGSDGWSARNLVSDDYEPEVEGTLSVQPQANPVRGFE 687
            .|:|...::.|:::.|..|.|.|  |.|:.||||.|:..|..|.|....|..:::..:..:|.||
Zfish   272 VILFTRSEDARELLAAAARMNVT--FIWVASDGWGAQESVVHDSEKAANGAFTIELASYSIREFE 334

  Fly   688 EYFLSLTVENNQRNPWFVEFWEDHFQCRYPGSTSTPYNNYTKQCTTKERLSRQNTDF--EDQLQF 750
            :||..||.|.|.|||||.|:||.:|.|          |.....|.:|   |.:|..|  |.::.|
Zfish   335 DYFTKLTPELNTRNPWFREYWEHNFGC----------NLQDHGCASK---SLRNDLFKPESKIMF 386

  Fly   751 VSDAVMAFAYALRDMHRDLCGGGPSLCEAMKPTKGADLLK-YLRKVEFEGL-----SGDEFRFDG 809
            |.:||.|.||||.:|.:.:|.....:|:||||..|....: ::.|.:|:..     :.:..||..
Zfish   387 VVNAVYAMAYALHNMRQAVCPNTTKVCDAMKPGNGKRFYREFILKTKFDAPFRPADTENVVRFTS 451

  Fly   810 NGDGPARYNIIHFKQSQAGQYHWVKVGEYTEGELRLNMTEVKFKRLSPKPPESVCSLPCLVGQAK 874
            .||...||||.|::: :..:|.:.|||.:.:| |.||.:.|.:  .....|.|.||.||...:||
Zfish   452 LGDSLGRYNIFHYRK-EDNKYVYRKVGYWAQG-LVLNTSLVPW--AGGVAPTSQCSDPCQPNEAK 512

  Fly   875 KYVEGESCCWHCFNCTTYQIRHPDDETHCKLCKLGTLPDAHKQYCRPIPEIYLRPESAWAIGAMA 939
            ....|:.|||.|..|..:|...  :|..|..|..|..|.|:...|..:||.|:....|||:|.:.
Zfish   513 SMQPGDVCCWICIPCQPHQFLL--NEFTCVDCGFGQWPLANLTGCYELPEEYIHWSDAWAVGPVT 575

  Fly   940 FSATGILVTLFVMGVFVRHNDTPIVRASGRELSYILLAGIFMCYGVTFALVLKPTNIVCAIQRFG 1004
            .:..|:|.||.|.|:|:|.||||:|:|||||||||||.|:.:||.:||..:.||:..|||::|.|
Zfish   576 IACLGMLCTLAVAGLFLRSNDTPVVKASGRELSYILLFGVLLCYAMTFIYIAKPSAFVCALRRLG 640

  Fly  1005 VGFCFTVVYAALLTKTNRIARIFKAGKQSAKRPSFISPKSQLVICACLVSVQILINGVWMVI-AP 1068
            :|..|.|.|:|||||||||||||...:.||:||.||||.||:.|||.|:|.|:|:..||::: ||
Zfish   641 LGTSFAVCYSALLTKTNRIARIFGGARDSAQRPRFISPASQVAICAALISAQLLVALVWLLVEAP 705

  Fly  1069 SHAMHHYPTREDNL-LVCDSYIDASYMIAFSYPIFLIVICTVYAVLTRKIPEAFNESKHIGFTMY 1132
            .......|.|.|.: |.|:| :|:|.:::.||...||::||.||..|||.||.|||:|.||||||
Zfish   706 GVRKEVGPDRRDVVTLKCNS-LDSSMLVSLSYNCILIILCTFYAFKTRKCPENFNEAKFIGFTMY 769

  Fly  1133 TTCVIWLAFVPLYFGTANHVPLRITSMSVTISLSASVTIACLFSPKLYIILIRPERNVRQSMMPP 1197
            |||:|||||.|:::.||:...::.|:|.:::|||.||.:.|||:||::|||.:|::||...... 
Zfish   770 TTCIIWLAFQPIFYVTASDYRVQTTTMCISVSLSGSVVLGCLFAPKIHIILFQPQKNVTSLRAK- 833

  Fly  1198 RYGNMHRTAGTGPS---SMMAAAVVTAATCAQEEKIQKHITPTNTENSL 1243
              .|...:|.|.||   |..:|:.:....|...|.:.      :|.:||
Zfish   834 --DNRFSSAVTAPSSTYSQASASTIVPTVCNGREVVD------STTSSL 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_Type_1 73..>152 CDD:299141
PBP1_mGluR 393..847 CDD:107357 179/472 (38%)
ANF_receptor 422..820 CDD:279440 156/412 (38%)
NCD3G 861..910 CDD:284890 17/48 (35%)
7tm_3 945..1181 CDD:278433 127/237 (54%)
grm2bNP_001274476.1 PBP1_mGluR_groupII 37..487 CDD:107370 179/472 (38%)
ANF_receptor 67..462 CDD:279440 156/412 (38%)
NCD3G 499..547 CDD:284890 18/49 (37%)
7tm_3 581..818 CDD:278433 127/237 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9DN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1154468at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100392
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.720

Return to query results.
Submit another query.