DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtt and casr

DIOPT Version :9

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:XP_017211901.1 Gene:casr / 560607 ZFINID:ZDB-GENE-050119-8 Length:956 Species:Danio rerio


Alignment Length:991 Identity:274/991 - (27%)
Similarity:464/991 - (46%) Gaps:142/991 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 GDVILGGLMMVH----SREDSITCGPIMPQ------GGIQALEAMLFTIDRINREQ-LLPNITLG 446
            ||::||||..:|    |::..:...|...:      .|.:.|::|:|.|:.||... ||||||||
Zfish    34 GDILLGGLFPMHFGVASKDQDLAARPESTECVRYNFRGFRWLQSMIFAIEEINNSSTLLPNITLG 98

  Fly   447 AHILDDCDKDSYGLEMAVDFI-KGSISNIDDAEYHCNKTQVRKVISGVVGAASSVTSIQVANLLR 510
            ..|.|.|:..|..||.::.|: :..|.:::..|: ||.|........||||:.|..|..||:||.
Zfish    99 YRIFDTCNTVSKALEASLSFVAQNKIDSLNLDEF-CNCTGNIPSTIAVVGASGSAVSTAVADLLG 162

  Fly   511 LFRIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQVKAMVEIVKRMGWSYVSIIYEESNYGIKAF 575
            ||.|||:||.|:|..||||.:::.|.||||:|.||..||..|::...|::|..|..:..||....
Zfish   163 LFYIPQISYASSSRLLSNKNQYKSFMRTIPTDEYQAIAMAAIIEHFQWNWVIAIASDDEYGRPGI 227

  Fly   576 EELEELLARHNICIAIKEKLVKDSGVAEDIAYDNIVQKL---LTKPRARGAIIFGSDQEVRQVMR 637
            |:.|..:...:|||.:...:.:....||       :::|   :....|:..::|.|..::..:::
Zfish   228 EKFENEMFHRDICIDLNVLISQYVDEAE-------IRRLADRIQNSSAKVIVVFASGPDIEPLVK 285

  Fly   638 AVRRANATGSFSWIGSDGWSARNLVS-DDYEPEVEGTLSVQPQANPVRGFEEYFLSLTVENNQRN 701
            .:.|.|.|... |:.|:.|::.:||: .:|...:.||:....:|..:.||:::...:..:.:..|
Zfish   286 EMVRRNITDRV-WLASEAWASSSLVAKPEYLDVMGGTIGFALRAGHIPGFKDFLQQVHPKKSSHN 349

  Fly   702 PWFVEFWEDHFQCRYP----------GSTSTPYNNYTKQCTTKERLSRQNTDFEDQLQF-----V 751
            .:..||||:.|.|...          ||||     :...||.:|.::...|.:.|....     |
Zfish   350 EFVREFWEETFNCYLEDSPRNADSENGSTS-----FRPLCTGEEDIASVETPYLDYTHLRISYNV 409

  Fly   752 SDAVMAFAYALRDMHRDLCGGGPSL-----CEAMKPTKGADLLKYLRKVEFEGLSGDEFRFDGNG 811
            ..||.|.|.||:|:.  .|..|..|     |..::..:...:||.||.:.|....|:..|||...
Zfish   410 YVAVYAIAQALQDIL--TCTPGKGLFSNGSCADIRKVEAWQVLKQLRHLNFIDSMGERVRFDNGS 472

  Fly   812 DGPARYNIIHFKQS-QAGQYHWVKVGEYT-----EGELRLNMTEVKFK-RLSP---------KPP 860
            :..|.|.||::.:| :.|...:.:||.|:     ..:|.::.:::.:. ||:.         :.|
Zfish   473 ELSANYTIINWHRSPEDGSVVFKEVGYYSIHNKNVAKLSIDKSKILWNGRLTEVMCCFSFLYQVP 537

  Fly   861 ESVCSLPCLVGQAKKYVEGE-SCCWHCFNCTTYQIRHPDDETHCKLCKLGTLPDAHKQYCRPIPE 924
            .|.||:.|..|..|..::|| :||:.|..|:..:.....|.:.|..|...:..:.:...|.....
Zfish   538 FSNCSVECEPGTRKGIIDGEPTCCFECTECSDGEYSDHKDASFCVKCPNNSWSNGNHTSCFLKQI 602

  Fly   925 IYLRPESAWAIGAMAFSATGILVTLFVMGVFVRHNDTPIVRASGRELSYILLAGIFMCYGVTFAL 989
            .:|.....:.|....|:..|:|:|.||:||||:..|||||:||.||||::||..:..|:..:...
Zfish   603 EFLSWTEPFGIALALFAVLGVLLTAFVLGVFVQFRDTPIVKASNRELSFLLLFSLICCFSSSLIF 667

  Fly   990 VLKPTNIVCAIQRFGVGFCFTVVYAALLTKTNRIARIFKAGKQSAKRPSFISPK-----SQLVIC 1049
            :.:|.:..|.:::...|..|.:..:.:|.||||:..:|:     ||.|:.:..|     .|.::.
Zfish   668 IGEPQDWTCRVRQPAFGISFVLCISCILVKTNRVLLVFE-----AKIPTSLHRKWWGLNLQFLLV 727

  Fly  1050 ACLVSVQILINGVWMVIAPSHAMHHYPTREDNLLVCD--SYIDASYMIAFSYPIFLIVICTVYAV 1112
            .....||::|..||:..||..:..:|...|...:.|:  |.:...::|  .|...|..||..:|.
Zfish   728 FLFTFVQVMICVVWLYNAPPGSYKNYDIDEIIFITCNEGSMMALGFLI--GYTCLLAAICFFFAF 790

  Fly  1113 LTRKIPEAFNESKHIGFTMYTTCVIWLAFVPLYFGTANHVPLRITSMSVTISLSASVT-IACLFS 1176
            .:||:||.|.|:|.|.|:|....::|::|:|.||.|....   ::::.|...|::|.: :||:|.
Zfish   791 KSRKLPENFTEAKFITFSMLIFFIVWISFIPAYFSTYGKF---VSAVEVIAILASSFSLLACIFF 852

  Fly  1177 PKLYIILIRPERNVRQSMMPPRYGNMHRTAGTGPSSMMAAAVVTAATCAQEEKIQKHITPTNTEN 1241
            .|:||||::|.||..:.:          ...|...:..|||..|.          :|       :
Zfish   853 NKVYIILLKPSRNTIEEV----------RCSTAAHAFKAAAKATL----------RH-------S 890

  Fly  1242 SLKTKKLCEMATQTISSIITSLDINAYNQIPYADQYVPNNATTATTTPTDKGSGNGNSNSNSNTN 1306
            |...|:...:...:.||                    |:::.:..|        |||...:.:|.
Zfish   891 SGFRKRSSSVGGSSASS--------------------PSSSISMKT--------NGNEMESPSTR 927

  Fly  1307 GSSNSNSNSNGDGDVA 1322
            ...:....|.|.|.|:
Zfish   928 RHGSKPRVSFGSGTVS 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_Type_1 73..>152 CDD:299141
PBP1_mGluR 393..847 CDD:107357 147/495 (30%)
ANF_receptor 422..820 CDD:279440 129/423 (30%)
NCD3G 861..910 CDD:284890 15/49 (31%)
7tm_3 945..1181 CDD:278433 77/243 (32%)
casrXP_017211901.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9DN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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