DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtt and boss

DIOPT Version :9

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:NP_542440.1 Gene:boss / 43146 FlyBaseID:FBgn0000206 Length:896 Species:Drosophila melanogaster


Alignment Length:1138 Identity:203/1138 - (17%)
Similarity:367/1138 - (32%) Gaps:417/1138 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 PLPDGRRSSPAN---------ADLTYDHFELEDYQRYANID------LASPRSGRHRGR------ 337
            |.|..:::.|.:         |..|.|...       :::|      ::|...|...|.      
  Fly    52 PQPTSQQAKPISITTRAPTTVASTTDDEVS-------SSVDGQLAPLISSTTEGPSSGTTASLVP 109

  Fly   338 HLPLNNMNLMLPLSSADGSGKYLRSLPDSVSFQNDRLYATQPQRHWPVKREAIVEGDVILGGLMM 402
            .:.||  .|.|.::||| .|..:|...:.|.                     |:||||:|..|  
  Fly   110 EICLN--GLQLTVNSAD-EGTVIRKQEEFVK---------------------ILEGDVVLSVL-- 148

  Fly   403 VHSREDSITCGPIMPQGGIQALEAMLFTIDRINREQL-------------LPNITLGAHI----- 449
                    |..|          ::.||.|:|:|:..|             :.|.:|..::     
  Fly   149 --------TKDP----------DSALFVINRVNQANLIMADFEIGIRAISIDNASLAENLLIQEV 195

  Fly   450 --LDDCDKDSYGLEMAVDFIKGSISNIDDAEYHCNKTQVRKVISGVVGAASSVTSIQVANLLRLF 512
              |..|...|.|:.:..:..|...|.|.|.||:         |..:.|.             |..
  Fly   196 QFLQQCTTYSMGIFVDWELYKQLESVIKDLEYN---------IWPIPGT-------------RAH 238

  Fly   513 RIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQVKAMVEIVKRMGWSYVSIIYEESNYGIKAFEE 577
            ..|:|::                                ::.:|.|.......|.:...::.:.|
  Fly   239 LFPKVAH--------------------------------LLHQMPWGEKIASVEIATETLEMYNE 271

  Fly   578 LEELLARHNICIAIKEKLVKDSGVAEDIAYDNIVQKLLTKPRARGAIIFGSDQEVRQVMRAVRRA 642
            ..|...:.::|:...:        ::|..|                |:||               
  Fly   272 FMEAARQEHMCLMHFK--------SDDNVY----------------IMFG--------------- 297

  Fly   643 NATGSFSWIGSDGWSARNLVSDDYEPEVEGTLSVQPQANPVRGFEEYFLSLTVENNQRNPWFVEF 707
                             |.::..::.  .|||...|                          .:.
  Fly   298 -----------------NKLASHFKE--NGTLFSVP--------------------------TDR 317

  Fly   708 WEDHFQCRYPGSTSTPYNNYTKQCTTKERLSRQNTDFEDQL---QFVSDAVMAFAYALRDMHRDL 769
            .:|.|....|........|.....|..| |....|..::.|   ..:...|::||.::.|:...|
  Fly   318 TDDEFLADLPNRAFVLMENEIDLSTAVE-LDATPTALDEILIGKSVLPSRVLSFAGSIIDLMNWL 381

  Fly   770 CGGGPSLCEAMKPTKGADLLKYLRKVEFEGLSGDEFRFDGNGDGPARYNIIHFKQSQAGQYHWVK 834
            .|   ||.:..|..:..||  |:.:                    :.:|.::|.:.      | :
  Fly   382 RG---SLSKHCKRGEEHDL--YVLE--------------------SCFNFLNFIED------W-R 414

  Fly   835 VGEYTEGE----------LRLNMTEVKFKRLSPKPPESVCSLPCLVGQAKKYVEGESCCWHCFNC 889
            ..||.:..          :|...|.:.|:....|    |.:|..:.|:::..:...:......|.
  Fly   415 TSEYRQAHDTAEILSLLLMRKLGTAMNFQMYQKK----VLTLDKITGESRTELREIASQNFVTNV 475

  Fly   890 TTYQIRHPDDETHCKL-CKLGTLPDAHKQYC----RPIPEIYLRPES---------AWAIGAMAF 940
            |||...:.|:.|..:| .|.|.:.:.  ||.    |..|.:: ..||         .|....:..
  Fly   476 TTYYHYNRDNHTSLELKTKFGQVFNC--QYSAGDNRRYPFLF-DGESVMFWRIKMDTWVATGLTA 537

  Fly   941 SATGILVTLFVMGVFVRHNDTPIVRASGRE-------------LSYILLAGIFMCYG-------- 984
            :..|::.||.:: ||:      :||.|..:             ||.||:...|:.|.        
  Fly   538 AILGLIATLAIL-VFI------VVRISLGDVFEGNPTTSILLLLSLILVFCSFVPYSIEYVGEQR 595

  Fly   985 ---VTF--ALVLKPTNIVCAIQRFGVGFCFTVVYAALLTKTNRIARIFKAGKQSAKRPSFISPKS 1044
               |||  |..|   |.:||::.|.:...:..|::.||.:...:|.|...|       .|:|..:
  Fly   596 NSHVTFEDAQTL---NTLCAVRVFIMTLVYCFVFSLLLCRAVMLASIGSEG-------GFLSHVN 650

  Fly  1045 ---QLVICACLV------SVQILINGVWMVIAPSHAMHHYPTREDNLLVCDSYIDASY---MIAF 1097
               |.||||..|      |||:|:           .||    .....:.|::.....:   ::|:
  Fly   651 GYIQAVICAFSVVAQVGMSVQLLV-----------VMH----VASETVSCENIYYGRWLWGLLAY 700

  Fly  1098 SYPIFLIVICTVYAVLTRKIPEAFNESKH--------IGFTMYTTCVIWLAFVPL-YFGTANHVP 1153
            .:.:    :|.|.|:    ||..:...::        ||..:  ..|||:|::.| .||.    .
  Fly   701 DFAL----LCCVGAL----IPSIYRSQRNYREGILIVIGSVL--IMVIWVAWIALSLFGD----E 751

  Fly  1154 LRITSMSVTISLSASVTIACLFSPKLYIILIRPERNVRQSMMPPRYGNMHRTAGTGPSSMMAAAV 1218
            .|..::.:.:..|....:..:..|:.::|:...||:.....:|               |:.:.|.
  Fly   752 WRDAAIPLGLQASGWAVLVGILIPRTFLIVRGIERSDIAQALP---------------SLTSLAF 801

  Fly  1219 VTAATCAQEEKIQKHITPTNTENSLKTKKLCEMATQTISSIITSLDINAYNQIPYADQYVPN--- 1280
            ......:.|:.:.:.:.|     :::.....|:..|:.|.|.| |.:....  |...|:..|   
  Fly   802 AQNNQYSSEQSVYECVNP-----AMRHCSQDEVNHQSPSEIPT-LPLRGGG--PRRQQFFANLRQ 858

  Fly  1281 -NATTATTTPTDKGSGNGNSNSNSNTNGSSNSN 1312
             ||......|..:...:.:.:|.|:...|.:.|
  Fly   859 ANANINPQRPPPRPQQSPSRSSVSSLPPSPDHN 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_Type_1 73..>152 CDD:299141
PBP1_mGluR 393..847 CDD:107357 73/486 (15%)
ANF_receptor 422..820 CDD:279440 61/420 (15%)
NCD3G 861..910 CDD:284890 11/49 (22%)
7tm_3 945..1181 CDD:278433 61/282 (22%)
bossNP_542440.1 7tm_3 <692..779 CDD:278433 18/100 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24060
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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