DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtt and GRM3

DIOPT Version :9

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:NP_000831.2 Gene:GRM3 / 2913 HGNCID:4595 Length:879 Species:Homo sapiens


Alignment Length:876 Identity:360/876 - (41%)
Similarity:530/876 - (60%) Gaps:42/876 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 VKREAIVEGDVILGGLMMVHSR-EDSITCGPIMPQGGIQALEAMLFTIDRINREQ-LLPNITLGA 447
            ::||..:|||::||||..::.: ..:..||.|....|||.||||||.||.||::. |||.:.||.
Human    29 LRREIKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGV 93

  Fly   448 HILDDCDKDSYGLEMAVDFIKGSISNIDDAEYHCN------KTQVRKVISGVVGAASSVTSIQVA 506
            ||||.|.:|:|.||.:::|::.|::.:|:|||.|.      :..:..:|:||:|.:.|..|||||
Human    94 HILDTCSRDTYALEQSLEFVRASLTKVDEAEYMCPDGSYAIQENIPLLIAGVIGGSYSSVSIQVA 158

  Fly   507 NLLRLFRIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQVKAMVEIVKRMGWSYVSIIYEESNYG 571
            ||||||:|||:||.|||.:||:|.|::||:||:|.|.||.|||.||::...|:|||.:..|.:||
Human   159 NLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYG 223

  Fly   572 IKAFEELEELLARHNICIAIKEKLVKDSGVAEDIAYDNIVQKLLTKPRARGAIIFGSDQEVRQVM 636
            ....|..|:.....|||||..|| |..|.:.:  :||:::::||.||.||..::|....:.|:::
Human   224 ETGIEAFEQEARLRNICIATAEK-VGRSNIRK--SYDSVIRELLQKPNARVVVLFMRSDDSRELI 285

  Fly   637 RAVRRANATGSFSWIGSDGWSARNLVSDDYEPEVEGTLSVQPQANPVRGFEEYFLSLTVENNQRN 701
            .|..||||  ||:|:.||||.|:..:....|....|.::::..:.|||.|:.||.||...||.||
Human   286 AAASRANA--SFTWVASDGWGAQESIIKGSEHVAYGAITLELASQPVRQFDRYFQSLNPYNNHRN 348

  Fly   702 PWFVEFWEDHFQCRYPGSTSTPYNNYTKQCTTKERLSRQNTDFEDQLQFVSDAVMAFAYALRDMH 766
            |||.:|||..|||.....     .|:.:.|.....:...|.:.|.::.||.:||.|.|:||..|.
Human   349 PWFRDFWEQKFQCSLQNK-----RNHRRVCDKHLAIDSSNYEQESKIMFVVNAVYAMAHALHKMQ 408

  Fly   767 RDLCGGGPSLCEAMKPTKGADLLK-YLRKVEF-----EGLSGDEF-RFDGNGDGPARYNIIHFKQ 824
            |.||.....||:|||...|..|.| ||.|:.|     .....|.. :||..|||..|||:.:| |
Human   409 RTLCPNTTKLCDAMKILDGKKLYKDYLLKINFTAPFNPNKDADSIVKFDTFGDGMGRYNVFNF-Q 472

  Fly   825 SQAGQYHWVKVGEYTEGELRLNMTEVKFKRLSPKPPESVCSLPCLVGQAKKYVEGESCCWHCFNC 889
            :..|:|.::|||.:.| .|.|::..:.:.|.|  .|.|.||.||...:.|....|:.|||.|..|
Human   473 NVGGKYSYLKVGHWAE-TLSLDVNSIHWSRNS--VPTSQCSDPCAPNEMKNMQPGDVCCWICIPC 534

  Fly   890 TTYQIRHPDDETHCKLCKLGTLPDAHKQYCRPIPEIYLRPESAWAIGAMAFSATGILVTLFVMGV 954
            ..|:  :..||..|..|..|..|.|....|..:||.|:|.|.|||||.:..:..|.:.|..|:.|
Human   535 EPYE--YLADEFTCMDCGSGQWPTADLTGCYDLPEDYIRWEDAWAIGPVTIACLGFMCTCMVVTV 597

  Fly   955 FVRHNDTPIVRASGRELSYILLAGIFMCYGVTFALVLKPTNIVCAIQRFGVGFCFTVVYAALLTK 1019
            |::||:||:|:||||||.||||.|:.:.|.:||..:.||:.::||::|.|:|..|.:.|:|||||
Human   598 FIKHNNTPLVKASGRELCYILLFGVGLSYCMTFFFIAKPSPVICALRRLGLGSSFAICYSALLTK 662

  Fly  1020 TNRIARIFKAGKQSAKRPSFISPKSQLVICACLVSVQILINGVWMVI-APSHAMHHYPTREDNLL 1083
            ||.|||||...|..|:||.||||.||:.||..|:.|||::..||::: ||....:....:.:.::
Human   663 TNCIARIFDGVKNGAQRPKFISPSSQVFICLGLILVQIVMVSVWLILEAPGTRRYTLAEKRETVI 727

  Fly  1084 VCDSYIDASYMIAFSYPIFLIVICTVYAVLTRKIPEAFNESKHIGFTMYTTCVIWLAFVPLYFGT 1148
            :..:..|:|.:|:.:|.:.|:::|||||..|||.||.|||:|.|||||||||:|||||:|:::.|
Human   728 LKCNVKDSSMLISLTYDVILVILCTVYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVT 792

  Fly  1149 ANHVPLRITSMSVTISLSASVTIACLFSPKLYIILIRPERNVRQSMMPPRYGNMHRTAGTGPS-S 1212
            ::...::.|:|.:::|||..|.:.|||:||::|||.:|::||....:   :.|....:|||.: |
Human   793 SSDYRVQTTTMCISVSLSGFVVLGCLFAPKVHIILFQPQKNVVTHRL---HLNRFSVSGTGTTYS 854

  Fly  1213 MMAAAVVTAATCAQEEKIQKHITPTNTENSL 1243
            ..:|:......|...|.:.      :|.:||
Human   855 QSSASTYVPTVCNGREVLD------STTSSL 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_Type_1 73..>152 CDD:299141
PBP1_mGluR 393..847 CDD:107357 195/468 (42%)
ANF_receptor 422..820 CDD:279440 174/411 (42%)
NCD3G 861..910 CDD:284890 17/48 (35%)
7tm_3 945..1181 CDD:278433 110/236 (47%)
GRM3NP_000831.2 PBP1_mGluR_groupII 37..494 CDD:107370 195/468 (42%)
ANF_receptor 67..469 CDD:279440 174/411 (42%)
Glutamate binding. /evidence=ECO:0000250 172..174 0/1 (0%)
NCD3G 506..554 CDD:284890 18/49 (37%)
7tm_3 588..825 CDD:278433 110/236 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9DN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1154468at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100392
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X509
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.720

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