DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtt and Grm6

DIOPT Version :9

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:NP_075209.1 Gene:Grm6 / 24419 RGDID:2747 Length:871 Species:Rattus norvegicus


Alignment Length:854 Identity:358/854 - (41%)
Similarity:523/854 - (61%) Gaps:54/854 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 GDVILGGLMMVHSR-EDSITCGPIMPQGGIQALEAMLFTIDRINRE-QLLPNITLGAHILDDCDK 455
            |.:.||||..||:| .....||.:..:.|:..|||||:.:||:|.: :|||.:.|||.:||.|.:
  Rat    31 GGLTLGGLFPVHARGAAGRACGALKKEQGVHRLEAMLYALDRVNADPELLPGVRLGARLLDTCSR 95

  Fly   456 DSYGLEMAVDFIKGSI---SNIDDAEYHC-------NKTQVRKVISGVVGAASSVTSIQVANLLR 510
            |:|.||.|:.|::..|   .:.|:|...|       ......:|:: ||||::|..||.|||:||
  Rat    96 DTYALEQALSFVQALIRGRGDGDEASVRCPGGVPPLRSAPPERVVA-VVGASASSVSIMVANVLR 159

  Fly   511 LFRIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQVKAMVEIVKRMGWSYVSIIYEESNY---GI 572
            ||.|||:||.||:||||:..|:::|||.:|.|.||.:|||:||:.:||:|||.:..|.||   |:
  Rat   160 LFAIPQISYASTAPELSDSTRYDFFSRVVPPDSYQAQAMVDIVRALGWNYVSTLASEGNYGESGV 224

  Fly   573 KAFEELEELLARHNICIAIKEKLVKDSGVAEDIAYDNIVQKLLTKPRARGAIIFGSDQEVRQVMR 637
            :||.::..  ....:|||...|:.::....|   :..::::|:..|.|||.|||.::.::|:|:.
  Rat   225 EAFVQISR--EAGGVCIAQSIKIPREPKPGE---FHKVIRRLMETPNARGIIIFANEDDIRRVLE 284

  Fly   638 AVRRANATGSFSWIGSDGWSARNLVSDDYEPEVEGTLSVQPQANPVRGFEEYFLSLTVENNQRNP 702
            |.|:||.||.|.|:|||.|.::.....:.|.|..|.:::.|:...:.||::||::.::|||:||.
  Rat   285 ATRQANLTGHFLWVGSDSWGSKISPILNLEEEAVGAITILPKRASIDGFDQYFMTRSLENNRRNI 349

  Fly   703 WFVEFWEDHFQCRYPGSTSTPYNNYTKQCTTKERLSRQNT-DFEDQLQFVSDAVMAFAYALRDMH 766
            ||.||||::|.|:.. |:....::.|::||.:||:.:.:. :.|.::|||.|||.|.|:||..||
  Rat   350 WFAEFWEENFNCKLT-SSGGQSDDSTRKCTGEERIGQDSAYEQEGKVQFVIDAVYAIAHALHSMH 413

  Fly   767 RDLCGGGPSLCEAMKPTKGADLLKYLRKVEFEGLSGDEFRFDGNGDGPARYNIIHFK----QSQA 827
            :.||.|...||.||:||.|..||.|:|.|.|.|.:|....|:.|||.|.||:|..::    .:.:
  Rat   414 QALCPGHTGLCPAMEPTDGRTLLHYIRAVRFNGSAGTPVMFNENGDAPGRYDIFQYQATNGSASS 478

  Fly   828 GQYHWVKVGEYTEGELRLNMTEVKFKRLSPKPPESVCSLPCLVGQAKKYVEGESCCWHCFNCTTY 892
            |.|.  .||::.|. |||:|..:::.....:.|.|.|||||..|:.||.|:|..|||||..|..|
  Rat   479 GGYQ--AVGQWAEA-LRLDMEVLRWSGDPHEVPPSQCSLPCGPGERKKMVKGVPCCWHCEACDGY 540

  Fly   893 QIRHPDDETHCKLCKLGTLPDAHKQYCRPIPEIYLRPESAWAIGAMAFSATGILVTLFVMGVFVR 957
              |...||..|:.|.....|..:...|||.|.:.|...|.||...:..:..||:.|..:|..|:|
  Rat   541 --RFQVDEFTCEACPGDMRPTPNHTGCRPTPVVRLTWSSPWAALPLLLAVLGIMATTTIMATFMR 603

  Fly   958 HNDTPIVRASGRELSYILLAGIFMCYGVTFALVLKPTNIVCAIQRFGVGFCFTVVYAALLTKTNR 1022
            ||||||||||||||||:||.|||:.|.:||.:|.:|...:||.:|..:|...|:.|:||||||||
  Rat   604 HNDTPIVRASGRELSYVLLTGIFLIYAITFLMVAEPCAAICAARRLLLGLGTTLSYSALLTKTNR 668

  Fly  1023 IARIFKAGKQSAKRPSFISPKSQLVICACLVSVQILINGVWMVIAPSHAMHHY-------PTRED 1080
            |.|||:.||:|...|.||||.|||||...|.|:|::....|:...|.|::..|       |.:..
  Rat   669 IYRIFEQGKRSVTPPPFISPTSQLVITFGLTSLQVVGVIAWLGAQPPHSVIDYEEQRTVDPEQAR 733

  Fly  1081 NLLVCDSYIDASYMIAFSYPIFLIVICTVYAVLTRKIPEAFNESKHIGFTMYTTCVIWLAFVPLY 1145
            .:|.|| ..|.|.:....|.:.|:|.|||||:..|.:||.|||:|.|||||||||:|||||||::
  Rat   734 GVLKCD-MSDLSLIGCLGYSLLLMVTCTVYAIKARGVPETFNEAKPIGFTMYTTCIIWLAFVPIF 797

  Fly  1146 FGT---ANHVPLRITSMSVTISLSASVTIACLFSPKLYIILIRPERNVRQSMMPPRYGNMHRTAG 1207
            |||   |..:.::.|:::|::||||||::..|:.||.|:||..||:||::     |..::.:|  
  Rat   798 FGTAQSAEKIYIQTTTLTVSLSLSASVSLGMLYVPKTYVILFHPEQNVQK-----RKRSLKKT-- 855

  Fly  1208 TGPSSMMAA 1216
                |.|||
  Rat   856 ----STMAA 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_Type_1 73..>152 CDD:299141
PBP1_mGluR 393..847 CDD:107357 189/473 (40%)
ANF_receptor 422..820 CDD:279440 169/412 (41%)
NCD3G 861..910 CDD:284890 23/48 (48%)
7tm_3 945..1181 CDD:278433 121/245 (49%)
Grm6NP_075209.1 Periplasmic_Binding_Protein_Type_1 39..500 CDD:299141 185/470 (39%)
ANF_receptor 61..470 CDD:279440 170/415 (41%)
Glutamate binding. /evidence=ECO:0000250 169..171 0/1 (0%)
NCD3G 510..556 CDD:284890 23/47 (49%)
7tm_3 591..836 CDD:278433 121/245 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 850..871 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10177
eggNOG 1 0.900 - - E33208_3B9DN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1154468at2759
OrthoFinder 1 1.000 - - FOG0000883
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100392
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X509
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.720

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