DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtt and mgl-3

DIOPT Version :9

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:NP_001076735.3 Gene:mgl-3 / 177327 WormBaseID:WBGene00021152 Length:1008 Species:Caenorhabditis elegans


Alignment Length:993 Identity:333/993 - (33%)
Similarity:513/993 - (51%) Gaps:129/993 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 HWPVK---REAIVEGDVILGGLMMVH--SREDSITCGPIMPQGGIQALEAMLFTIDRINRE-QLL 440
            |.|:.   ::..|.|.::||||..:|  .|..|..||.|....|:|.:.||||.::::||: |||
 Worm    29 HIPISSTVKQLTVPGQIVLGGLFPIHEAGRNASHQCGKIKADQGVQRMVAMLFALEKVNRDRQLL 93

  Fly   441 PNITLGAHILDDCDKDSYGLEMAVDFIKGSISNIDDAEYHCNKT--QVRKVISGVVGAASSVTSI 503
            |..:|||.|||.|..|||.||..::|||..:||.|........|  ..|:.:..|||||.|..|:
 Worm    94 PQASLGAQILDTCSVDSYALEQTLEFIKSVMSNGDGVTCADGSTGSYTRQPVVAVVGAAGSQVSV 158

  Fly   504 QVANLLRLFRIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQVKAMVEIVKRMGWSYVSIIYEES 568
            .||::|:||:||||||.||..|||.|.||.:|||.:|.|:.|.:.|..::..:.|:||..|.:..
 Worm   159 MVASMLQLFKIPQVSYSSTGAELSEKPRFAFFSRVVPPDNLQAQVMARVIGALEWTYVHAIADTG 223

  Fly   569 NYGIKAFEELEELLARHNICIAIKEKLVKDSGVAEDIA-------YDNIVQKLLTKPRARGAIIF 626
            :||.:..:......|.:.|||         .|..:.|:       :.:::.::....:|||.::|
 Worm   224 SYGERGMDSFRAAAAENGICI---------DGDVQKISRRWTEKNFRDLLIRMHRTRKARGVVMF 279

  Fly   627 GSDQEVRQVMRAVRRANATG------SFSWIGSDGWSARNLVSDDYEPEVEGTLSVQPQANPVRG 685
            ..:..::::::.:....|.|      .|.::.||.|..:..|....|....|.:::.|......|
 Worm   280 VDEDNLKRLLKTLDLLVAEGHTELDRHFWFVASDSWGIKQSVVRGLEHRTYGAITIAPMVREETG 344

  Fly   686 FEEYFLSLTVENNQRNPWFVEFWEDHFQCRYPGSTSTPYNNYTKQCTTKERLSRQNTDFEDQLQF 750
            :.|||.||:.:.      || |.|:.|:  |.|.::|........|.....::.:.   |..:.|
 Worm   345 YLEYFRSLSPKG------FV-FLEEFFE--YLGCSATVDVKTFGDCFDMVNITLKQ---ESYVPF 397

  Fly   751 VSDAVMAFAYALRDMHRDLCGGGP-SLCE-AMKPTKGADLLKYLRKVEFEGLSGDEFRFDGNGDG 813
            |.|.|...|.|:.....|.||..| ..|. |....:|..|.:|.|.:..  :..:....|.||||
 Worm   398 VVDTVKIIAKAISMYIEDDCGKIPFHKCTLAQSGFRGERLQRYYRNMSL--IKNEPALIDANGDG 460

  Fly   814 PARYNIIHFKQSQAGQYHWVKVGEY--TEGELRLNMTEVK--FKRLSPKPPESVCSLPCLVGQAK 874
            ..||::  |:....|.|.  |||::  |:..|.:.:.:::  ||....:.|.||||..|..|..:
 Worm   461 IGRYDV--FQLDINGVYQ--KVGKWRSTDDFLSVEVEKIRHAFKTAHGERPMSVCSTDCPRGHYR 521

  Fly   875 KYVEGESCCWHCFNCTTYQIRHPDDETHCKLCKLGTLPDAHKQYCRPIPEIYLRPESAWAIGAMA 939
            .| :.::|||.|..|.|....|  :||.|:.|.:|.:||....:|.|||.:.::.::.|::...|
 Worm   522 AY-QDQTCCWACIPCDTSTSIH--NETSCEECAVGMVPDRTLHFCVPIPPVSMQWDTTWSLIPAA 583

  Fly   940 FSATGILVTLFVMGVFVRHNDTPIVRASGRELSYILLAGIFMCYGVTFALVLKPTNIVCAIQRFG 1004
            ||..||..|:||:.||::.::||::.||||||.|.:::||.|||.:||.||.:||.|.|::.|..
 Worm   584 FSTLGIASTIFVVSVFLKFSNTPVIMASGRELCYCMMSGIGMCYTLTFFLVSQPTVITCSMTRIL 648

  Fly  1005 VGFCFTVVYAALLTKTNRIARIFKAGKQSAKRPSFISPKSQLVICACLVSVQILINGVWMVIAPS 1069
            :|...:.:|||::|||||:||:||  ..||:||.||:||:|:.||..:||||::...||::..|.
 Worm   649 MGLSMSAIYAAIITKTNRLARVFK--PDSAQRPRFITPKAQVGICMGIVSVQLIGTFVWILFDPP 711

  Fly  1070 HAMHHYPTREDNLLVCDSYIDASYMIAFSYPIFLIVICTVYAVLTRKIPEAFNESKHIGFTMYTT 1134
            ..|..:|||.:.:|.|.: ..:..:|:..|.|.|||.|||||..||||||.|||::|||||||:|
 Worm   712 GTMIVFPTRTEAVLTCKA-TTSHLLISLLYNILLIVACTVYAFKTRKIPENFNETRHIGFTMYST 775

  Fly  1135 CVIWLAFVPLYFGTANHVPLRITSMSVTISLSASVTIACLFSPKLYIILIRPERNVRQSMMPPRY 1199
            |::||||.|:||.|.:...::|||:.:.||||.:|.:.|.|:||:||:|.:|.:|||.       
 Worm   776 CILWLAFGPIYFATQSDFRIQITSLCMCISLSGTVALICFFAPKVYIVLFQPYKNVRT------- 833

  Fly  1200 GNMHRTAGTGPSSMMAAAVVTAATCAQEEKIQKHIT----------PTNTENSLKTKKLCEMATQ 1254
                |.:..|            ....|:.:....:|          |.::..|.|.....|.::.
 Worm   834 ----RQSAVG------------RLVNQQMRFMSQLTYNPDGCNSYQPMSSNQSYKPSISAEESSH 882

  Fly  1255 TISS------------IITSLDINAYNQIPYADQYVPNNATTATTTPTDKGSGNGNSNSNSN--- 1304
            |.::            :|..|..:    :|.:|:    |......:..||...|.|:|.||.   
 Worm   883 TSNAQVQQPTRAIPPHVIEQLAAS----LPISDK----NDLVKKLSLQDKFFNNNNNNENSEEIR 939

  Fly  1305 -------------TNGSS 1309
                         |||||
 Worm   940 RRRPSSVHTVGAVTNGSS 957

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_Type_1 73..>152 CDD:299141
PBP1_mGluR 393..847 CDD:107357 149/475 (31%)
ANF_receptor 422..820 CDD:279440 129/415 (31%)
NCD3G 861..910 CDD:284890 18/48 (38%)
7tm_3 945..1181 CDD:278433 115/235 (49%)
mgl-3NP_001076735.3 Periplasmic_Binding_Protein_type1 41..493 CDD:385651 150/478 (31%)
NCD3G 507..556 CDD:369426 20/51 (39%)
7tmC_mGluRs_group2_3 577..825 CDD:320600 122/250 (49%)
TM helix 1 577..601 CDD:320600 11/23 (48%)
TM helix 2 613..634 CDD:320600 11/20 (55%)
TM helix 3 643..665 CDD:320600 7/21 (33%)
TM helix 4 689..705 CDD:320600 6/15 (40%)
TM helix 5 730..753 CDD:320600 10/22 (45%)
TM helix 6 762..787 CDD:320600 17/24 (71%)
TM helix 7 794..819 CDD:320600 10/24 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100392
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X509
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.