DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtt and Grm2

DIOPT Version :9

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:NP_001153825.1 Gene:Grm2 / 108068 MGIID:1351339 Length:872 Species:Mus musculus


Alignment Length:893 Identity:385/893 - (43%)
Similarity:537/893 - (60%) Gaps:74/893 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 PVKREAIVEGDVILGGLMMVHSR----EDSITCGPIMPQGGIQALEAMLFTIDRINRE-QLLPNI 443
            |.|:...:|||::||||..||.:    |:   |||:....|||.||||||.:|||||: .|||.:
Mouse    21 PAKKVLTLEGDLVLGGLFPVHQKGGPAEE---CGPVNEHRGIQRLEAMLFALDRINRDPHLLPGV 82

  Fly   444 TLGAHILDDCDKDSYGLEMAVDFIKGSISNIDDAEYH-------CNKTQVRKVISGVVGAASSVT 501
            .|||||||.|.||::.||.|:||::.|:|...|...|       ...:.....|:||:|.:.|..
Mouse    83 RLGAHILDSCSKDTHALEQALDFVRASLSRGADGSRHICPDGSYATLSDAPTAITGVIGGSYSDV 147

  Fly   502 SIQVANLLRLFRIPQVSYFSTSPELSNKQRFEYFSRTIPSDHYQVKAMVEIVKRMGWSYVSIIYE 566
            |||||||||||:|||:||.|||.:||:|.|::||:||:|.|.:|.|||.||::...|:|||.:..
Mouse   148 SIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFFQAKAMAEILRFFNWTYVSTVAS 212

  Fly   567 ESNY---GIKAFEELEELLAR-HNICIAIKEKLVKDSGVAEDIAYDNIVQKLLTKPRARGAIIFG 627
            |.:|   ||:||    ||.|| .|||:|..||:.:....|   |::.:|:.||.||.||.|::|.
Mouse   213 EGDYGETGIEAF----ELEARARNICVATSEKVGRAMSRA---AFEGVVRALLQKPSARVAVLFT 270

  Fly   628 SDQEVRQVMRAVRRANATGSFSWIGSDGWSARNLVSDDYEPEVEGTLSVQPQANPVRGFEEYFLS 692
            ..::.|:::.|.:|.||  ||:|:.||||.|...|....|...||.::::..:.|:..|..||.:
Mouse   271 RSEDARELLAATQRLNA--SFTWVASDGWGALESVVAGSERAAEGAITIELASYPISDFASYFQN 333

  Fly   693 LTVENNQRNPWFVEFWEDHFQCRYPGSTSTPYNNYTKQCTTKERLSRQNTDFEDQ--LQFVSDAV 755
            |...||.|||||.||||:.|:|.:          ..:.|...   |.:...||.:  :.||.:||
Mouse   334 LDPWNNSRNPWFREFWEERFRCSF----------RQRDCAAH---SLRAVPFEQESKIMFVVNAV 385

  Fly   756 MAFAYALRDMHRDLCGGGPSLCEAMKPTKGADLLK-YLRKVEFEGL-----SGDEFRFDGNGDGP 814
            .|.|:||.:|||.||.....||:||:|..|..|.| ::..|:|:..     :.||.|||..|||.
Mouse   386 YAMAHALHNMHRALCPNTTRLCDAMRPVNGRRLYKDFVLNVKFDAPFRPADTDDEVRFDRFGDGI 450

  Fly   815 ARYNIIHFKQSQAGQYHWVKVGEYTEGELRLNMTEVKFKRLSPKP---PESVCSLPCLVGQAKKY 876
            .||||..:.::..|:|.:.|||.:.|| |.|:.:.:.:  .||..   |.|.||.|||..:.|..
Mouse   451 GRYNIFTYLRAGNGRYRYQKVGYWAEG-LTLDTSIIPW--ASPSAGTLPASRCSEPCLQNEVKSV 512

  Fly   877 VEGESCCWHCFNCTTYQIRHPDDETHCKLCKLGTLPDAHKQYCRPIPEIYLRPESAWAIGAMAFS 941
            ..||.|||.|..|..|:.|.  ||..|..|.||..|:|....|..:|:.|:|...|||:|.:..:
Mouse   513 QPGEVCCWLCIPCQPYEYRL--DEFTCADCGLGYWPNASLTGCFELPQEYIRWGDAWAVGPVTIA 575

  Fly   942 ATGILVTLFVMGVFVRHNDTPIVRASGRELSYILLAGIFMCYGVTFALVLKPTNIVCAIQRFGVG 1006
            ..|.|.||||:|||||||.||:|:||||||.||||.|:|:||.:||..:.||:..||.::|.|:|
Mouse   576 CLGALATLFVLGVFVRHNATPVVKASGRELCYILLGGVFLCYCMTFIFIAKPSTAVCTLRRLGLG 640

  Fly  1007 FCFTVVYAALLTKTNRIARIFKAGKQSAKRPSFISPKSQLVICACLVSVQILINGVWMVI-APSH 1070
            ..|:|.|:|||||||||||||...::.|:||.||||.||:.||..|:|.|:||...|:|: ||..
Mouse   641 TAFSVCYSALLTKTNRIARIFGGAREGAQRPRFISPASQVAICLALISGQLLIVAAWLVVEAPGI 705

  Fly  1071 AMHHYPTREDNLLVCDSYIDASYMIAFSYPIFLIVICTVYAVLTRKIPEAFNESKHIGFTMYTTC 1135
            .....|.|.:.:.:..::.|||.:.:.:|.:.||.:||:||..|||.||.|||:|.|||||||||
Mouse   706 GKETAPERREVVTLRCNHRDASMLGSLAYNVLLIALCTLYAFKTRKCPENFNEAKFIGFTMYTTC 770

  Fly  1136 VIWLAFVPLYFGTANHVPLRITSMSVTISLSASVTIACLFSPKLYIILIRPERNVRQSMMP-PRY 1199
            :|||||:|:::.|::...::.|:|.|::|||.||.:.|||:|||:|||.:|::||.....| .|:
Mouse   771 IIWLAFLPIFYVTSSDYRVQTTTMCVSVSLSGSVVLGCLFAPKLHIILFQPQKNVVSHRAPTSRF 835

  Fly  1200 GNMHRTA----GTGPSSMMAAAVVTAATCAQEEKIQKHITPTNTENSL 1243
            |:....|    |.|..|.:...|     |...|.:.      :|.:||
Mouse   836 GSAAPRASANLGQGSGSQLVPTV-----CNGREVVD------STTSSL 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_Type_1 73..>152 CDD:299141
PBP1_mGluR 393..847 CDD:107357 202/477 (42%)
ANF_receptor 422..820 CDD:279440 178/417 (43%)
NCD3G 861..910 CDD:284890 21/48 (44%)
7tm_3 945..1181 CDD:278433 125/236 (53%)
Grm2NP_001153825.1 PBP1_mGluR_groupII 30..480 CDD:107370 201/475 (42%)
ANF_receptor 60..456 CDD:279440 178/417 (43%)
Glutamate binding. /evidence=ECO:0000250 166..168 0/1 (0%)
NCD3G 498..545 CDD:284890 22/48 (46%)
7tm_3 579..816 CDD:278433 125/236 (53%)
Important for interaction with HTR2A. /evidence=ECO:0000250 677..685 4/7 (57%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9DN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1154468at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100392
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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