DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtt and grm1

DIOPT Version :10

Sequence 1:NP_001260806.1 Gene:mtt / 35832 FlyBaseID:FBgn0050361 Length:1472 Species:Drosophila melanogaster
Sequence 2:XP_017949676.2 Gene:grm1 / 100495945 XenbaseID:XB-GENE-980107 Length:1172 Species:Xenopus tropicalis


Alignment Length:1155 Identity:401/1155 - (34%)
Similarity:591/1155 - (51%) Gaps:163/1155 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 LNNMNLMLPLSSADGSGKYLRSLPDSVSFQNDRLYATQPQRHWPVKREAIVEGDVILGGLMMVH- 404
            |..:||:|.|....|...:...|....:|   .:.|:.|      :..|.::||:|:|.|..|| 
 Frog    13 LKMVNLLLILMMTVGLDIFYGGLFGRNTF---LVCASSP------RSVARMDGDIIIGALFSVHH 68

  Fly   405 ----SREDSITCGPIMPQGGIQALEAMLFTIDRINREQ-LLPNITLGAHILDDCDKDSYGLEMAV 464
                .:.....||.|..|.|||.:|||..|:|:||.:| ||||||||..|.|.|...|..||.::
 Frog    69 QPPAEKVPERKCGEIREQYGIQRVEAMFHTLDQINMDQNLLPNITLGTEIRDSCWHSSVALEQSI 133

  Fly   465 DFIKGSISNIDDAEYHCNKT---------QVRKVISGVVGAASSVTSIQVANLLRLFRIPQVSYF 520
            :||:.|:.::.|.:....|.         :::|.|:||:|..||..:|||.|||:||.|||::|.
 Frog   134 EFIRDSLISMRDEKDGAGKCLDATPTPHGRIKKPIAGVIGPGSSSVAIQVQNLLQLFDIPQIAYS 198

  Fly   521 STSPELSNKQRFEYFSRTIPSDHYQVKAMVEIVKRMGWSYVSIIYEESNYGIKAFEELEELLARH 585
            :||.:||:|..::||.|.:|||..|.:||::||||..|:|||.::.|.|||....|..:|:.|:.
 Frog   199 ATSIDLSDKTLYKYFLRVVPSDILQARAMLDIVKRYNWTYVSAVHTEGNYGESGMEAFKEMAAQE 263

  Fly   586 NICIAIKEKLVKDSGVAEDIAYDNIVQKLLTK-PRARGAIIFGSDQEVRQVMRAVRRANATGSFS 649
            .:|||..:|:..::|   :..:|.:::||..: |:||..|.|.....||.::.|:||....|.|.
 Frog   264 GLCIAHTDKIYSNAG---ERNFDRLLKKLRERLPKARVVICFCEGMTVRGILMAMRRLGVAGEFL 325

  Fly   650 WIGSDGWSARNLVSDDYEPEVEGTLSVQPQANPVRGFEEYFLSLTVENNQRNPWFVEFWEDHFQC 714
            .||||||:.|:.|.:.||.|..|.::::.|:..|..|:.|:|.|.::.|.|||||.|||:..|||
 Frog   326 LIGSDGWADRDEVIEGYEAEANGGITMKLQSAEVMSFDTYYLGLRLDTNSRNPWFTEFWQHRFQC 390

  Fly   715 RYPGSTSTPYNN--YTKQCTTKERLSRQNTDFEDQLQFVSDAVMAFAYALRDMHRDLCGGGPSLC 777
            |.||.   |..|  :.|.|...|.| .:|...:.::.||.:|:.|.|:.|.|||..||.|...||
 Frog   391 RIPGH---PQENRSFKKICKGNETL-EENYVQDSKMGFVINAIYAMAHGLHDMHSALCPGHVGLC 451

  Fly   778 EAMKPTKGADLLKYLRKVEFEGLSGDEFRFDGNGDGPARYNIIHFKQSQAGQYHWVKVGEYTEGE 842
            :||||..|:.||::|.|..|.|:||::..||..||.|.||:|::.:|.:..:|.:|::|.:.|| 
 Frog   452 DAMKPIDGSKLLEFLIKASFLGISGEDVWFDEKGDAPGRYDIMNLQQIEPNRYDYVQIGAWHEG- 515

  Fly   843 LRLNMTEVKFKRLSPKPPESVCSLPCLVGQAKKYVEGE-SCCWHCFNCTTYQIRHPDDETHCKLC 906
             .|:|.:.:.:........||||.||..|:.|...:|| ||||.|..|...:.  ..||..||.|
 Frog   516 -ILSMDDYRIQANKSGIVRSVCSDPCSKGEIKVIRKGEVSCCWICTPCKENEF--VQDEFTCKAC 577

  Fly   907 KLGTLPDAHKQYCRPIPEIYLRPESAWAIGAMAFSATGILVTLFVMGVFVRHNDTPIVRASGREL 971
            ..|..|:.....|.|||..||:.....:|.|:|||..|||:|:||..:|:.:.|||:|::|.|||
 Frog   578 DQGAWPNPGLTGCEPIPVKYLQWSDIESIIAVAFSCLGILITMFVTLIFILYRDTPVVKSSSREL 642

  Fly   972 SYILLAGIFMCYGVTFALVLKPTNIVCAIQRFGVGFCFTVVYAALLTKTNRIARIFKAGKQS--A 1034
            .||:|||||:.|...|.|:.|||...|.:||..||....:.|:||:|||||||||....|:.  .
 Frog   643 CYIILAGIFLGYICPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILAGSKKKICT 707

  Fly  1035 KRPSFISPKSQLVICACLVSVQILINGVWMVIAPSHAMHHYPTREDNLLVCDSYIDASYMIAFSY 1099
            ::|.|:|..:|:||.:.|:|:|:.:....:::.|...:..||:.::..|:|:: .:...:....|
 Frog   708 RKPRFMSACAQVVIASILISLQLSLVVSLIIMEPPMPILSYPSIKEVYLICNT-SNLGVVAPLGY 771

  Fly  1100 PIFLIVICTVYAVLTRKIPEAFNESKHIGFTMYTTCVIWLAFVPLYFGTANHVPLRITSMSVTIS 1164
            ...||:.||.||..||.:|..|||:|:|.|||||||:|||||||:||| :|:   :|.:.|..:|
 Frog   772 NGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFG-SNY---KIITTSFAVS 832

  Fly  1165 LSASVTIACLFSPKLYIILIRPERNVRQSMMPPRYGNMHRTAGTGPSSMMAAAVVTAATCAQEEK 1229
            ||.:|.:.|:|:||:|||:.:||||||.:........||...|..|             |.    
 Frog   833 LSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKTP-------------CR---- 880

  Fly  1230 IQKHITPTNTENSLKTKKLCEMATQTISSIITSLDINAYNQIPYADQYVPNNATTATTTPTDKGS 1294
                   :||..|:..:|                              .|:...|         :
 Frog   881 -------SNTFLSIFRRK------------------------------KPSTGNT---------N 899

  Fly  1295 GNGNSNSNSNTNG-------------SSNSNSNSNGDGDVATEQVVANNNKINQRQHGQPAVAFA 1346
            .||.|.|.|...|             |.:..|...|....|   |:....|..|.|:  .::.|:
 Frog   900 SNGKSVSWSEPGGRQVQKGQHMWHRLSVHVKSKETGSNQTA---VIKPLTKGYQAQN--KSLTFS 959

  Fly  1347 ITSTNNHISGPAATITTTAATGETTTEALVATITTPLATVDGSETMSVAPNNGHGNNGSQRPPVL 1411
            .||||        |:.......|..|....|.:::|.:.:             |....|..||  
 Frog   960 DTSTN--------TLYNVEEEDENETGRFNAMMSSPTSII-------------HRRLNSTPPP-- 1001

  Fly  1412 QTNLXLNAQQLQQ--QLLKEQQRQQAELQTQHPQQQHGTQSSSSDTASTG 1459
                   :|:..:  ..|.||..:...||.....|.||.    .|..|||
 Frog  1002 -------SQEFDEGSMYLSEQVSKSLPLQKSIIDQLHGV----IDRFSTG 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mttNP_001260806.1 Periplasmic_Binding_Protein_type1 73..>157 CDD:471960
PBP1_mGluR 393..848 CDD:380585 191/472 (40%)
NCD3G 860..912 CDD:462210 22/52 (42%)
7tmC_mGluRs 932..1184 CDD:320173 111/253 (44%)
TM helix 1 932..957 CDD:320173 12/24 (50%)
TM helix 2 969..990 CDD:320173 12/20 (60%)
TM helix 3 999..1023 CDD:320173 11/23 (48%)
TM helix 4 1045..1065 CDD:320173 6/19 (32%)
TM helix 5 1089..1115 CDD:320173 7/25 (28%)
TM helix 6 1123..1146 CDD:320173 17/22 (77%)
TM helix 7 1153..1178 CDD:320173 8/24 (33%)
grm1XP_017949676.2 PBP1_mGluR_groupI 49..522 CDD:380597 193/481 (40%)
NCD3G 533..583 CDD:462210 22/51 (43%)
7tmC_mGluR1 603..852 CDD:320565 111/253 (44%)
TM helix 1 603..628 CDD:320565 12/24 (50%)
TM helix 2 640..661 CDD:320565 12/20 (60%)
TM helix 3 670..694 CDD:320565 11/23 (48%)
TM helix 4 718..738 CDD:320565 6/19 (32%)
TM helix 5 761..787 CDD:320565 7/25 (28%)
TM helix 6 795..818 CDD:320565 17/22 (77%)
TM helix 7 821..846 CDD:320565 9/27 (33%)
GluR_Homer-bdg 1122..1172 CDD:431390
Blue background indicates that the domain is not in the aligned region.

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