DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mal-A4 and mal1

DIOPT Version :10

Sequence 1:NP_610381.1 Gene:Mal-A4 / 35827 FlyBaseID:FBgn0033294 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_595063.1 Gene:mal1 / 2539976 PomBaseID:SPBC1683.07 Length:579 Species:Schizosaccharomyces pombe


Alignment Length:607 Identity:190/607 - (31%)
Similarity:295/607 - (48%) Gaps:97/607 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 WWKTASFYQIYPRSFKDSDGNGVGDLNGVTEKLEYLKEIGVTATWLSPFLKSPMADFGYDISDFK 88
            ||:..|.|||||.|||||:|:|.|||.|:..|::|||.:.|.:.||.|...||:.|.|||:||:|
pombe    13 WWRETSVYQIYPASFKDSNGDGFGDLEGIISKVDYLKALNVESIWLCPIYPSPLKDMGYDVSDYK 77

  Fly    89 AVDPLFGTMEDFENMVSRAKELGVKIILDFVPNHSSDECDWFLRSAAGEEEYK-DYYMWHPGFLD 152
            .:|..:||:||.:.::....|..:|:::|.|.||:||:.:||..|.:.:...| |:|.|.|...:
pombe    78 QIDSRYGTLEDLDRLMKALHERDMKLVMDLVLNHTSDQHEWFKESRSSKTNPKRDWYFWKPARYN 142

  Fly   153 EDGTRRPPTNWVSVFRGSAWEWHEGRQEYYLHQFHKKQPDFNFRNPVVREEMNNVLRFWLEKGVD 217
            |.|.|.||.||.|.|..|||||.|..||||||.:...|||.|:..|.|||.::::|||||::|||
pombe   143 EKGERLPPNNWRSYFDTSAWEWDEATQEYYLHLWSVGQPDLNWETPKVREAVHDILRFWLDRGVD 207

  Fly   218 GFRVDAIYHAFEIEADENGNYPDEPRNDWTNDPDEYGYTHKIYTVDQPETPHLVYEWRQILEQFQ 282
            |||:|||.   .|..|:  .:.|.|   .|:|..||...::.| .:.|.....:.....||.::.
pombe   208 GFRLDAIN---MISKDQ--RFLDAP---ITDDRYEYQLAYQYY-ANGPRIHEYLNGIGNILTEYD 263

  Fly   283 ADNGGDERILMVETWSPIEIVMHYYGNETADGAQIPFNFQLISNLHYDSDAYHYEYLINNWLNLM 347
            |.:.| |...:::|    ..::|..|   ||..::...|| ...:..|.|...::|:..:| .|.
pombe   264 AFSVG-EMPYVLDT----NEILHVVG---ADRRELTMIFQ-FDFVDLDLDPNQHKYIEGSW-ELS 318

  Fly   348 PEGKS-----------ANW---VIGNHDKNRVGSRFGAD-------RVDLFNILLLTLPGCSITY 391
            ...||           ..|   .|.|||:.|..||:.:|       ...|..:.::...|....:
pombe   319 DLKKSLKKWQSALLSGGGWNASFIENHDQTRTVSRYLSDSPKYRAYSSKLMALFIIFQSGTPFVF 383

  Fly   392 QGEELGMLDGYVSW--EDTVDPQACNGYEANYMDN----------------SRDPARTPMHWSDE 438
            ||:||.:.:....|  ::.:|.:..|.::.....|                :||..||||||...
pombe   384 QGQELALANIPRDWPIDEYLDVETQNFWKLFMSGNPSQEEIEKTMDIVNKRARDNGRTPMHWDSS 448

  Fly   439 TMAGFT-TGNSTWLPVSTDYRQRNVKTERGVSLSHLNVFKRLQQLRQE--PSIEEGSAE------ 494
            ...||| .|...|:.|:.||::.|...:.....|....:.:..:||:|  .::..||.|      
pombe   449 PNGGFTKAGVKPWMRVTNDYKEWNAANQVNDPESPYTFWSKALELRKELKDAVVYGSFELISEED 513

  Fly   495 ------VKAVSNYVLAVKRHLSGDFVYISLFNIFDSIENVNLSSVFGSLPAKFQYALVTEKSIKK 553
                  |:..|.|.|.:..:.:|:.|      .:|.  .:||:|          |.::    :..
pombe   514 PSIVAFVRESSTYKLIILLNFTGNKV------SYDC--PLNLTS----------YEIL----LDN 556

  Fly   554 VGDQVSAGS-VTLMPHESIVLR 574
            ..|.:...| |||.|:::::|:
pombe   557 YKDFICMTSPVTLNPYQAVLLK 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mal-A4NP_610381.1 AmyAc_maltase 24..492 CDD:200467 169/510 (33%)
mal1NP_595063.1 AmyAc_SI_OligoGlu_DGase 15..496 CDD:200472 166/499 (33%)
Malt_amylase_C 504..>544 CDD:445893 10/47 (21%)

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