DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mal-A1 and SBE2.2

DIOPT Version :9

Sequence 1:NP_476627.3 Gene:Mal-A1 / 35824 FlyBaseID:FBgn0002570 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_195985.3 Gene:SBE2.2 / 831769 AraportID:AT5G03650 Length:805 Species:Arabidopsis thaliana


Alignment Length:607 Identity:123/607 - (20%)
Similarity:201/607 - (33%) Gaps:219/607 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RPQSAACLLLAIVGFVGATEWWESGNYYQIYPRSFRDSDGDGIGDLNGVTEKLQYLKDIGFTGTW 66
            ||:|    |......||.:......|.|    .:|||             :.|..:|.:|:....
plant   287 RPKS----LRIYEAHVGMSSTEPMVNTY----ANFRD-------------DVLPRIKKLGYNAVQ 330

  Fly    67 LSPIFK-SPMVDFGYDISDFYQIHPEYGTMEDFERMIAKAKEVGIKIILDFVPNHSSTENEWFTK 130
            :..|.: |....|||.:::|:......||.|:.:.:|.:|.|:|:.:::|.|.:|:|      ..
plant   331 IMAIQEHSYYASFGYHVTNFFAPSSRCGTPEELKSLIDRAHELGLVVLMDIVHSHAS------KN 389

  Fly   131 SVDSDPVY--KDFYIWHDGKINNETGEREPPSNWNSE-FRYSAWEWNEVRQQYYLHQFAIQQADL 192
            ::|...::  .|.:.:|       :|.|.....|:|. |.|.:||                    
plant   390 TLDGLNMFDGTDAHYFH-------SGPRGYHWMWDSRLFNYGSWE-------------------- 427

  Fly   193 NYRNPAVVNEMKNVIRFWLGK-GVSGFRIDAVPYLFEVDLDRYNQYPDEPLTNDSVNCPDPDDHC 256
                  |:..:.:..|:||.: ...|||.|.|..:.                             
plant   428 ------VLRYLLSNARWWLEEYKFDGFRFDGVTSMM----------------------------- 457

  Fly   257 YTQH--------IYTQ--DMPETIDMVYQWRELVDEFHVENGGDKRLLMTEAYTSFENI--MTYY 309
            ||.|        .||:  .:...:|.|.....:.|..|.        |..||.|..|::  |..:
plant   458 YTHHGLSVGFTGNYTEYFGLETDVDAVNYLMLVNDMIHG--------LYPEAITVGEDVSGMPTF 514

  Fly   310 GNGVRNGSHIPFNFDFLTSINNASKAGEYVEHIKK----WMDAMPEGVYA----NW------VLG 360
            ...|::|.   ..||:...:..|.|   ::|.:||    |.  |.:.:|.    .|      ...
plant   515 CIPVQDGG---VGFDYRLHMAIADK---WIEMLKKRDEDWQ--MGDIIYTLTNRRWSEKCISYAE 571

  Fly   361 NHDNKRVASRF--------------------------GVQRTDLINILLQTLPGHA-VTYNGEEL 398
            :||...|..:.                          |:....:|.::...|.|.. :.:.|.|.
plant   572 SHDQALVGDKTIAFWLMDKDMYDFMAVDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEF 636

  Fly   399 GMTDVWISW--------EDTVDPNACNSDPDNYYARSRDPARSPYQ-WDASSKAGFTSADHTWLP 454
            |..: ||.:        :.:|.|.      :|:   |.|..|..:. .||               
plant   637 GHPE-WIDFPRGEQRLSDGSVIPG------NNF---SYDKCRRRFDLGDA--------------- 676

  Fly   455 VADDYKTNNALQQLRAPRSHLQIFKKLVRVRKEPSF--RQGELNIQAIDDDVIIYSRQKTGSDLY 517
               ||.....||:......||:  :....:..|..|  |:.|.      |.||::.|    .|| 
plant   677 ---DYLRYRGLQEFDQAMQHLE--ENYGFMTSEHQFISRKDEA------DRVIVFER----GDL- 725

  Fly   518 VIVLNLGSTSKTLDLTKYYELG 539
            |.|.|...||...|    |.:|
plant   726 VFVFNFHWTSSYFD----YRIG 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mal-A1NP_476627.3 AmyAc_maltase 21..496 CDD:200467 103/543 (19%)
Alpha-amylase 45..404 CDD:278554 78/416 (19%)
SBE2.2NP_195985.3 PLN02447 61..805 CDD:215246 123/607 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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