DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mal-A1 and Slc3a2

DIOPT Version :9

Sequence 1:NP_476627.3 Gene:Mal-A1 / 35824 FlyBaseID:FBgn0002570 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_062156.2 Gene:Slc3a2 / 50567 RGDID:3073 Length:566 Species:Rattus norvegicus


Alignment Length:602 Identity:131/602 - (21%)
Similarity:211/602 - (35%) Gaps:191/602 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ACLLLAIVGFVG-------------------ATEWWESGNYYQIYP-RSFRDSDGDGIGDLNGVT 51
            |.|||..:|::|                   ...||..|..|:|.. ::|...:..||.   |:.
  Rat   116 ALLLLFWLGWLGMLAGAVVIIVRAPRCRELPVQRWWHKGALYRIGDLQAFVGPEARGIA---GLK 177

  Fly    52 EKLQYLKDIGFTGTWLSPIFKSPMVDFGYDISDFYQIHPEYGTMEDFERMIAKAKEVGIKIILDF 116
            ..|:||..:...|..|.||.|:...:  .:.:|..||.|:.|:.|||:.::..||:..|.||||.
  Rat   178 NHLEYLSTLKVKGLVLGPIHKNQKDE--VNETDLKQIDPDLGSQEDFKDLLQSAKKKSIHIILDL 240

  Fly   117 VPNHSSTENEWFTKSVDSDPVYKDFYIWHDGKINNETGEREPPSNWNSEFRYSAWEWNEVRQQYY 181
            .||:.. :|.||.                            ||                      
  Rat   241 TPNYKG-QNAWFL----------------------------PP---------------------- 254

  Fly   182 LHQFAIQQADLNYRNPAVVNEMKNVIRFWLGKGVSGFRIDAVPYLFEVDLDRYNQYPDEPLTNDS 246
                   |||:      |..:||..:..||..||.||::..|..|....|               
  Rat   255 -------QADI------VATKMKEALSSWLQDGVDGFQVRDVGKLANASL--------------- 291

  Fly   247 VNCPDPDDHCYTQHIYTQDMPETIDMVYQWRELVDEFHVENGGDKRLLMTEAYTSFENIMTYYGN 311
                                     .:.:|:.:...|    ..|:.|:...|.:..:.|:    |
  Rat   292 -------------------------YLAEWQNITKNF----SEDRLLIAGTASSDLQQIV----N 323

  Fly   312 GVRNGSHIPFNFDFLTS--INNASKAGEYVE-HIKKWMDAMPEGVYANWVLGNHDNKRVASRFGV 373
            .:.:.|.:     .|||  ::.....||:.| .:.|:::|.... :.:|.:....  .:.|....
  Rat   324 ILESTSDL-----LLTSSYLSQPVFTGEHAELLVIKYLNATGSR-WCSWSVSQAG--LLTSFIPA 380

  Fly   374 QRTDLINILLQTLPGHAVTYNGEELGMTDVWISWEDTVDPNACNSDPDNYYARSRDPARSPYQ-W 437
            |...|..:||.||||..|...|:|||:..|                     |....|..:|:. |
  Rat   381 QFLRLYQLLLFTLPGTPVFSYGDELGLQAV---------------------ALPGQPMEAPFMLW 424

  Fly   438 DASSKAGFTSADHTWLPVADDYKTNNALQQLRAPRSHLQIFKKLVRVR-KEPSFRQGELNIQAID 501
            :.||.:..:|      ||:.:.....   |...|.|.|..|::|..:| ||.|...|:.:..:..
  Rat   425 NESSNSQTSS------PVSLNMTVKG---QNEDPGSLLTQFRRLSDLRGKERSLLHGDFDALSSS 480

  Fly   502 DDVIIYSRQKTGSDLYVIVLN-----LGSTSKTLDLTKYYELGTQAEVI----TTSLSSQYIDGD 557
            ..:..|.|....::.|::|||     |.:.....:|.....|...|.::    :|.||.:  :|.
  Rat   481 SGLFSYVRHWDQNERYLVVLNFQDVGLSARVGASNLPAGISLPASANLLLSTDSTRLSRE--EGT 543

  Fly   558 VIKSTEFVANPYVGTVL 574
            .:.......|||.|.:|
  Rat   544 SLSLENLSLNPYEGLLL 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mal-A1NP_476627.3 AmyAc_maltase 21..496 CDD:200467 106/480 (22%)
Alpha-amylase 45..404 CDD:278554 77/361 (21%)
Slc3a2NP_062156.2 SLC3A2_N 85..156 CDD:292647 9/39 (23%)
AmyAc_family 139..469 CDD:298606 104/484 (21%)
AmyA 159..514 CDD:223443 109/509 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1384693at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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