DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mal-A1 and Amyrel

DIOPT Version :9

Sequence 1:NP_476627.3 Gene:Mal-A1 / 35824 FlyBaseID:FBgn0002570 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster


Alignment Length:619 Identity:120/619 - (19%)
Similarity:215/619 - (34%) Gaps:207/619 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AACLLLAIVGFVGATE----WWESGNYYQIYPRSFRDSDGDGIGDLNGVTEKLQ-YLKDIGFTGT 65
            |..|.|.:.|.:...:    ||.:.|.. ::...::.||         :.::.: :|...||.|.
  Fly     5 ALTLTLCLAGSLSLAQHNPHWWGNRNTI-VHLFEWKWSD---------IAQECESFLGPRGFAGV 59

  Fly    66 WLSPIFKS------PMVDFGYDISDFYQIHPEYGTMEDFERMIAKAKEVGIKIILDFVPNHSSTE 124
            .:||:.::      |..:....||  |::....|..|:|..|:.:..:||::|.:|.:.||.|.:
  Fly    60 QVSPVNENILSAGRPWWERYQPIS--YKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLNHMSGD 122

  Fly   125 NEWF---TKSVDSDPVYKDFYIWHDGKINNETGEREPPSNWNSEFRYSAWE---WNEVRQQYYLH 183
            .:..   |...:::|..|.|                |...:.::..:...|   ||:        
  Fly   123 FDGVAVGTAGTEAEPSKKSF----------------PGVPYTAQDFHPTCEITDWND-------- 163

  Fly   184 QFAIQQA------DLNYRNPAVVNEMKNVIRFWLGKGVSGFRIDAVPYLFEVDLDRYNQYPDEPL 242
            :|.:||.      ||:..:..|.:::...:...:..||:|||:||..::...||    :|....|
  Fly   164 RFQVQQCELVGLKDLDQSSDWVRSKLIEFLDHLIELGVAGFRVDAAKHMASEDL----EYIYSSL 224

  Fly   243 TNDSVNCPDPDDHCYTQHIYTQDMPETIDMVYQWRELVDEFHVENGGDKRLLMTEAYTSFENIMT 307
            :|.::      ||.:..:          ...:.::|::|..|.....|:                
  Fly   225 SNLNI------DHGFPHN----------SRPFIFQEVIDHGHETVSRDE---------------- 257

  Fly   308 YYGNGVRNGSHIPFNFDFLTSINNASKAGEYVEHIKKW---MDAMPEGVYANWVLGNHDNKRVAS 369
            |...|...      .|.|...|.||.:....::.::.|   ...:|.|....:| .||||:|.| 
  Fly   258 YKDLGAVT------EFRFSEEIGNAFRGNNALKWLQSWGTDWGFLPSGQALTFV-DNHDNQRDA- 314

  Fly   370 RFGVQRTDLINILLQTLPGHAVTYNGEE-------------LGMTDVWISW----EDTVDPNACN 417
                              |..:.|....             .|::.|..|:    .||..|.   
  Fly   315 ------------------GAVLNYKSPRQYKMATAFHLAYPYGISRVMSSFAFDDHDTPPPQ--- 358

  Fly   418 SDPDNYYARSRDPARSP-YQWDASSKAGFTSADHTWLPVADDYKTNNALQQLRAPRSHLQIFKKL 481
                    .:::...|| :..|.:...|:. .:|.|             :|:.|    :..||..
  Fly   359 --------DAQERIISPEFDADGACVNGWI-CEHRW-------------RQIYA----MVGFKNA 397

  Fly   482 VRVRK----------EPSFRQGELNIQAIDDDVIIYSRQKTGSDLYVIVLNLGSTSKTLDLTKYY 536
            ||..:          :.||.:|.....||::::...|:                     ||....
  Fly   398 VRDTEITGWWDNGDNQISFCRGNKGFLAINNNLYDLSQ---------------------DLNTCL 441

  Fly   537 ELGTQAEVITTSLSSQYIDGDVI-KSTEFVANPY 569
            ..||..:||:.||    |||... ||.....|.|
  Fly   442 PAGTYCDVISGSL----IDGSCTGKSVTVNENGY 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mal-A1NP_476627.3 AmyAc_maltase 21..496 CDD:200467 98/528 (19%)
Alpha-amylase 45..404 CDD:278554 73/393 (19%)
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 91/495 (18%)
Aamy_C 404..492 CDD:214749 21/93 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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