DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mal-A1 and Amy2a4

DIOPT Version :9

Sequence 1:NP_476627.3 Gene:Mal-A1 / 35824 FlyBaseID:FBgn0002570 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_001153622.1 Gene:Amy2a4 / 100043684 MGIID:3711258 Length:508 Species:Mus musculus


Alignment Length:633 Identity:124/633 - (19%)
Similarity:206/633 - (32%) Gaps:248/633 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLAIVGFVGATEWWESGNYYQIYPRSFRDSDG-DGIGDL------NGVTEKLQYLKDIGFTGTW 66
            |||:::||..|          |..|.:   ||| ..|..|      :...|..:||...||.|..
Mouse     5 LLLSLIGFCWA----------QYDPHT---SDGRTAIVHLFEWRWVDIAKECERYLAPKGFGGVQ 56

  Fly    67 LSPIFKS--------PMVDFGYDISDFYQIHPEYGTMEDFERMIAKAKEVGIKIILDFVPNH--- 120
            :||..::        |..:....||  |:|....|..::|..|:.:...||::|.:|.|.||   
Mouse    57 VSPPNENVVVHNPSRPWWERYQPIS--YKICTRSGNEDEFRDMVTRCNNVGVRIYVDAVINHMCG 119

  Fly   121 -------SSTENEWFTKSVDSDPVYKDFYIWHDGKINNETGEREPPSNWNSEFRYSAWEWNEVR- 177
                   |||...:...                   ||    ||.|:     ..||||::|:.: 
Mouse   120 AGNPAGTSSTCGSYLNP-------------------NN----REFPA-----VPYSAWDFNDNKC 156

  Fly   178 ---QQYYLHQFAIQQADL----------NYRNPAVVNEMKNVIRFWLGKGVSGFRIDAVPYLFEV 229
               ...|...:.::...|          :|....|.:.|.::|..    ||:|||:||       
Mouse   157 NGEIDNYNDAYQVRNCRLTGLLDLALEKDYVRTKVADYMNHLIDI----GVAGFRLDA------- 210

  Fly   230 DLDRYNQYPDEPLTNDSVNCPDPDDHCYTQHIYTQDMPETIDMVY----QW-----RELVDEFHV 285
                                        .:|::..|:...:|.::    :|     |..:.:..:
Mouse   211 ----------------------------AKHMWPGDIKAVLDKLHNLNTKWFSQGSRPFIFQEVI 247

  Fly   286 ENGGDKRLLMTEAYTSFENIMTYYGNGVRNGSHIPFNFDFLTSINNASKA--------GEYVEHI 342
            :.||       ||....|    |:|||            .:|.....:|.        ||.:.::
Mouse   248 DLGG-------EAIKGSE----YFGNG------------RVTEFKYGAKLGTVIRKWNGEKMSYL 289

  Fly   343 KKWMDAMPEGVYANWVL----------GNHDNKRVASRFGVQRTDLINILLQTLPGHAVTYNGEE 397
            |.|    .||    |.|          .||||:|                     ||..      
Mouse   290 KNW----GEG----WGLVPSDRALVFVDNHDNQR---------------------GHGA------ 319

  Fly   398 LGMTDVWISWEDTVDPNACNSDPDNYYARSRDPARSPYQWDASSKAGFTSADHTWL--------- 453
             |.:.:...|:..:...|......:.|..:|  ..|.|:|:.:.:.|....|  |:         
Mouse   320 -GGSSILTFWDARMYKMAVGFMLAHPYGFTR--VMSSYRWNRNFQNGKDQND--WIGPPNNNGVT 379

  Fly   454 ---------PVADDYKTNNALQQLRAPRSHLQIFKKLVRVRKEPSFRQGELNIQAIDDDVIIYSR 509
                     ...:|:...:..:|:|    ::..|:.:|..:...::.....|       .:.:||
Mouse   380 KEVTINADTTCGNDWVCEHRWRQIR----NMVAFRNVVNGQPFSNWWDNNSN-------QVAFSR 433

  Fly   510 QKTGSDLYVIVLNLGSTSKTLDLTKYYELGTQAEVITTSLSSQYIDGD 557
            ...|    .||.|....:.:..|......||..:||    |...:||:
Mouse   434 GNRG----FIVFNNDDWALSATLQTGLPAGTYCDVI----SGDKVDGN 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mal-A1NP_476627.3 AmyAc_maltase 21..496 CDD:200467 103/558 (18%)
Alpha-amylase 45..404 CDD:278554 82/423 (19%)
Amy2a4NP_001153622.1 AmyAc_bac_euk_AmyA 25..413 CDD:200456 97/523 (19%)
AmyA 46..>344 CDD:223443 82/425 (19%)
Aamy_C 420..507 CDD:214749 15/69 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.