DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e2 and cyp26b1

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001072655.1 Gene:cyp26b1 / 780112 XenbaseID:XB-GENE-991500 Length:511 Species:Xenopus tropicalis


Alignment Length:503 Identity:115/503 - (22%)
Similarity:191/503 - (37%) Gaps:101/503 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LALPLLLVAYLELSTFRRRRVLNKF------NGPRGLPLMGNAHQMGKNPSEILDTVFSWWHQYG 67
            :::.|||....:|...|.....:|.      .|..|.||:|.              .|.|..| |
 Frog    20 VSVALLLAVSQQLWQLRWAATRDKSCKLPIPKGSMGFPLVGE--------------TFHWILQ-G 69

  Fly    68 KDNFVFWIGTYSNVL-----------VTSSKYLEFILSSQTLITKSDIYQLTHPWLGLGLLTSTG 121
            .|........|.||.           ||.::.:..||..:..:..::..:.|...||...|.::.
 Frog    70 SDFQSSRREKYGNVFKTHLLGRPLIRVTGAENVRKILMGEHHLVSTEWPRSTRMLLGPNSLANSI 134

  Fly   122 SKWHKH-RKMITPAFHFN-----------ILQDFHEVMNENSTKFIKHLKTVAAGDNIFDFQEQA 174
            ...|:| ||:.:..|...           ::||...|.:.|....           |::.   :|
 Frog   135 GDIHRHKRKVFSKIFSHEALESYLPKIQLVIQDTLRVWSSNPESI-----------NVYC---EA 185

  Fly   175 HYLTLDVICDTAMGVSINAMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYP--AYS 237
            ..||..:.....:|..::  :...|.:.|.|:....|:              :.|..|.|  .|.
 Frog   186 QKLTFRMAIRVLLGFRLS--DEELSQLFQVFQQFVENV--------------FSLPVDVPFSGYR 234

  Fly   238 RTLKTLQDFTNEIIAKRIEAHKSGAVSTNAGDEFTRKKMAFLDTLLSSTID-GRPLNSKELYEEV 301
            |.::     ..|::.|.:|......:....|.::...    ||.|:.|..: |:.|..:||.:..
 Frog   235 RGIR-----AREMLLKSLEKAIQEKLQNTQGKDYADA----LDILIESGKEHGKELTMQELKDGT 290

  Fly   302 STFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDAT------FQEISQMKY 360
            ...:|..:.||.|..:..:..|.:|.....||   :.|:.|||.|.....      .:.||.:.|
 Frog   291 LELIFAAYATTASASTSLIMQLLKHPSVLEKL---REELRGNSILHNGCVCEGALRVETISSLHY 352

  Fly   361 LDLFIKEAQRVYPSVPFIGRFTEKDYVIDGDLVPKGTTLNLGLVMLGYNEKVFKDPHKFRPERF- 424
            ||..|||..|::..|....|...:.:.:||..:|||.::...:........||||...|.|:|| 
 Frog   353 LDCVIKEILRLFSPVSGGYRTVLQTFELDGFQIPKGWSVLYSIRDTHDTAPVFKDVDVFDPDRFG 417

  Fly   425 ---ELEKPGPFEYVPFSAGPRNCIGQKFALLEIKTVVSKI--IRNFEV 467
               ..:|.|.|.|:||..|.|||:|:..|.|.:|.:..::  :..||:
 Frog   418 QDRTEDKDGRFHYLPFGGGVRNCLGKHLAKLFLKVLAIELASMSRFEL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 109/471 (23%)
cyp26b1NP_001072655.1 p450 1..468 CDD:386267 115/503 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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