DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e2 and cyp19a1b

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_021326198.1 Gene:cyp19a1b / 60640 ZFINID:ZDB-GENE-001103-4 Length:513 Species:Danio rerio


Alignment Length:486 Identity:107/486 - (22%)
Similarity:196/486 - (40%) Gaps:124/486 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ILDTVF---SWWHQYGKDNFVFWIGTYSNVLVTSSKYLEFILSSQTLITKSDIYQLTHPWLGLGL 116
            :|..:|   :|.:|.......:|:|.  ..:::.|::|                     |:|:| 
Zfish    31 LLHRIFGVKNWRNQSALPGPGWWLGL--GPVLSYSRFL---------------------WMGIG- 71

  Fly   117 LTSTGSKWHKHR------------------KMITPAFHFNILQDFHEVMNENST-KF--IKHLKT 160
               |...::..:                  |.::.|.       :|.:.:.|.| :|  .|.|:.
Zfish    72 ---TACNYYNEKYGSIARVWINGEETVILSKQVSSAV-------YHVLKSNNYTGRFASAKGLQC 126

  Fly   161 VAA-------GDNIFDFQEQAHYLTLDVI---CDTAMGVSINAMENRSSSIVQAFKD-------- 207
            :..       ..||..:::...|.|..:.   ...::.|.::| .||...::|.|.|        
Zfish   127 IGMFEQGIIFNSNIAKWKKVRTYFTKALTGPGLQKSVEVCVSA-TNRQLDVLQEFTDASGHVDVL 190

  Fly   208 -----MCYNINMRAF--HPLKRNELLYR------------LAPD--------YPAYSRTLKTLQD 245
                 :..:::.|.|  .||...|||.:            :.||        |..|....|.|||
Zfish   191 NLLRCIVVDVSNRLFLRIPLNEKELLIKIHRYFSTWQTVLIQPDIFFKLDFVYRKYHLAAKELQD 255

  Fly   246 FTNEIIAKRIEAHKSGAVSTNAGDEFTRKKMAFLDTLLSSTIDGRPLNSKELYEEVSTFMFEGHD 310
                .:.|.:|..:....:|...||     |.|...|:.:. :...|:..::.:.|...:....|
Zfish   256 ----EMGKLVEQKRQAINNTEKLDE-----MDFATELIFAQ-NHDELSVDDVRQCVLEMVIAAPD 310

  Fly   311 TTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQEISQMKYLDLFIKEAQRVYPSV 375
            |.:..:.|.:.||.::...:.::.:|.:..:|:    ||....::.::..|:.||||:.|.:|.|
Zfish   311 TLSISLFFMLLLLKQNSAVEEQIVQEIQSQIGS----RDVESADLQKLNVLERFIKESLRYHPVV 371

  Fly   376 PFIGRFTEKDYVIDGDLVPKGTT--LNLGLVMLGYNEKVFKDPHKFRPERFELEKPGPFEYVPFS 438
            .||.|.:.:|..|||..|.|||.  ||:|.:   :..:.||.|::|..|.||...|..: :.||.
Zfish   372 DFIMRQSLEDDYIDGYRVAKGTNLILNIGRM---HKTEFFKKPNEFSLENFENTVPSRY-FQPFG 432

  Fly   439 AGPRNCIGQKFALLEIKTVVSKIIRNFEVLP 469
            .|||.|:|:..|::..|.::..::..|.|.|
Zfish   433 CGPRACVGKHIAMVMTKAILVTMLSRFTVCP 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 106/484 (22%)
cyp19a1bXP_021326198.1 p450 48..482 CDD:306555 103/469 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.