DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e2 and cyp26a1

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_012822016.1 Gene:cyp26a1 / 548901 XenbaseID:XB-GENE-855583 Length:492 Species:Xenopus tropicalis


Alignment Length:518 Identity:128/518 - (24%)
Similarity:206/518 - (39%) Gaps:117/518 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LALPLLLV---AYL-ELSTFRRRRVLNKFN----GPRGLPLMGNAHQMGKNPSEILDTVFSWWHQ 65
            ||||:||:   |.| |:....|:....: |    |..|||..|...||.....:.|...   ..:
 Frog    14 LALPVLLLLTAAKLWEVYCLSRKDASCR-NPLPPGTMGLPFFGETLQMVLQRRKFLQVK---RRK 74

  Fly    66 YGKDNFVFWIGTYSNVLVTSSKYL-EFILSSQTLITKSDIYQLTHPW-------LGLGLLTSTGS 122
            ||:.......|: ..|.||.::.: :.:|....|::       .| |       ||.|.|::...
 Frog    75 YGRIYKTHLFGS-PTVRVTGAENVRQILLGEHKLVS-------VH-WPASVRTILGAGCLSNLHD 130

  Fly   123 KWHKH-RKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDNIFDFQEQAHYLTLDVICDTA 186
            ..||: :|:|..||....|.::..:|.|...:                                 
 Frog   131 SEHKYTKKVIMQAFSREALANYVPLMEEELRR--------------------------------- 162

  Fly   187 MGVSINAMENRSSSIV--QAFKDMCYNINMR--------------------AFHPLKRNELLYRL 229
               |:|......|.::  .|.|.:.:.|.||                    ||..:.||  |:.|
 Frog   163 ---SVNLWLQSDSCVLVYPAIKRLMFRIAMRLLLGCDPQRLGREQEETLLEAFEEMTRN--LFSL 222

  Fly   230 APDYPAYSRTLKTLQDFTNEIIAKRIEAHKSGAVSTNAGDEFTRKKMAFLDTLLSSTID-----G 289
            ..|.| :|...:.|:  ...||..:||        .|..::..|:........|...||     |
 Frog   223 PIDVP-FSGLYRGLR--ARNIIHAQIE--------ENIKEKLQREPDGQCRDALQLLIDHSRRTG 276

  Fly   290 RPLNSKELYEEVSTFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKE---QREVMGNSELGRDAT 351
            .|:|.:.|.|..:..:|.||.||.|..:.....|:.|:|...|:.||   |..:....|..::.:
 Frog   277 EPVNLQALKESATELLFGGHGTTASAATSLTTFLALHKDVLEKVRKELESQGLLSNKPEEKKELS 341

  Fly   352 FQEISQMKYLDLFIKEAQRVYPSVPFIGRFTEKDYVIDGDLVPKGTTLNLGLVMLGYNEKVFKDP 416
            .:.:.|:||....|||..|:.|.|....|...|.:|::|..:|||..:...:.......::|.|.
 Frog   342 IEVLQQLKYTSCVIKETLRLSPPVAGGFRVALKTFVLNGYQIPKGWNVIYSIADTHGEAELFPDK 406

  Fly   417 HKFRPERFELEKPGP---FEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRN--FEVL---PAL 471
            .:|.|:||....||.   |.::||..|.|.|:|::||.:.:|..:.::.||  :|:|   ||:
 Frog   407 DEFNPDRFLTPLPGDSSRFGFIPFGGGVRCCVGKEFAKILLKVFIVELCRNCDWELLNGSPAM 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 115/480 (24%)
cyp26a1XP_012822016.1 p450 41..490 CDD:386267 118/491 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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