DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e2 and Cyp4a1

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_787031.1 Gene:Cyp4a1 / 50549 RGDID:68945 Length:509 Species:Rattus norvegicus


Alignment Length:543 Identity:167/543 - (30%)
Similarity:267/543 - (49%) Gaps:83/543 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LALPLLLVAYLELSTFRR--RRVLNKFNGPRGLPLMGNAHQMG-KNPSEILDTV------FSWWH 64
            |.|.||||..::....|:  .:...:|..|......|:....| |...:|:..|      |..| 
  Rat    25 LGLLLLLVKAVQFYLQRQWLLKAFQQFPSPPFHWFFGHKQFQGDKELQQIMTCVENFPSAFPRW- 88

  Fly    65 QYGKDNFVFWIGTYSNVLVTSSKYLEFILSSQTLITKSD-----IYQLTHPWLGLGLLTSTGSKW 124
                    || |:.:.::|....|::.||.      :||     :|:|..||:|.|||...|..|
  Rat    89 --------FW-GSKAYLIVYDPDYMKVILG------RSDPKANGVYRLLAPWIGYGLLLLNGQPW 138

  Fly   125 HKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDNIFDFQEQAHYLTLDVI--CDTAM 187
            .:||:|:|||||::||:.:.:.|.::....:...:.:|..|:..:..:....:|||.:  |..:.
  Rat   139 FQHRRMLTPAFHYDILKPYVKNMADSIRLMLDKWEQLAGQDSSIEIFQHISLMTLDTVMKCAFSH 203

  Fly   188 GVSINAMENRSSSIVQA---FKDMCYNINMRAFHPLKRNELLYRLAPDYPAYSRTLKTLQDFTNE 249
            ..|:. ::....|.:||   ..|:.::.....||   :|:.:|..:.:...::|..:...|.|:.
  Rat   204 NGSVQ-VDGNYKSYIQAIGNLNDLFHSRVRNIFH---QNDTIYNFSSNGHLFNRACQLAHDHTDG 264

  Fly   250 IIAKRIEAHKSGAVSTNAGD-EFTRKK--MAFLDTLLSSTID-GRPLNSKELYEEVSTFMFEGHD 310
            :|..|.:..:      |||: |..:||  :.|||.||.:.:: |..|:.|:|..||.||||||||
  Rat   265 VIKLRKDQLQ------NAGELEKVKKKRRLDFLDILLLARMENGDSLSDKDLRAEVDTFMFEGHD 323

  Fly   311 TTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQEISQMKYLDLFIKEAQRVYPSV 375
            ||.||||:..|.|:.|.:.|::..:|.:.|:|:   |...|:..:.|:.|..:.||||.|:||.|
  Rat   324 TTASGVSWIFYALATHPEHQQRCREEVQSVLGD---GSSITWDHLDQIPYTTMCIKEALRLYPPV 385

  Fly   376 PFIGRFTEKDYVI-DGDLVPKGTTLNLGLVMLGYNEKVFKDPHKFRPERFELEKP-GPFEYVPFS 438
            |.|.|........ ||..:|||..:.|.:..|.:|.||:.:|..|.|.||..:.| ....::|||
  Rat   386 PGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEVFDPSRFAPDSPRHSHSFLPFS 450

  Fly   439 AGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTIGLPDAERKKRDPYRHKYD 503
            .|.|||||::||:.|:|.:|:..:..||:||                          ||.:   .
  Rat   451 GGARNCIGKQFAMSEMKVIVALTLLRFELLP--------------------------DPTK---V 486

  Fly   504 PILSAVLTLKSENGLYIRLKERH 526
            ||....|.|||:||:|:.||:.|
  Rat   487 PIPLPRLVLKSKNGIYLYLKKLH 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 143/456 (31%)
Cyp4a1NP_787031.1 p450 52..503 CDD:278495 155/508 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348535
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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