DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e2 and Cyp12a4

DIOPT Version :10

Sequence 1:NP_477117.2 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster


Alignment Length:571 Identity:123/571 - (21%)
Similarity:231/571 - (40%) Gaps:150/571 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WFVLYIFLALPLLLVAYLEL------STFRRRRVLNKFNGPRG-------LP-LMGNAHQMGKNP 52
            |.....|..:|.|.:..|.:      ..::...::..|...|.       :| :|||...:..:.
  Fly    41 WLQAKPFEQIPRLNMWALSMKMSMPGGKYKNMELMEMFEAMRQDYGDIFFMPGIMGNPPFLSTHN 105

  Fly    53 SEILDTVFSWWHQYGKDNFVFW---IGTYSNVLVTSSKYLEFILSSQTLITKSDIYQLTHPWLGL 114
            .:..:.||.        |...|   .|.|: :|....:|            :.|.||..     :
  Fly   106 PQDFEVVFR--------NEGVWPNRPGNYT-LLYHREEY------------RKDFYQGV-----M 144

  Fly   115 GLLTSTGSKWHKHRKMITPAFHFNILQD-----FHEVMNENSTKFIKHL------KTVAAGDNIF 168
            |::.:.|..|...|.::.|.    ::|.     :::.|::.:.:|::.:      .|:.|.|   
  Fly   145 GVIPTQGKPWGDFRTVVNPV----LMQPKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAPD--- 202

  Fly   169 DFQEQAHYLTLDVICDTAMGVSINAMENRSSSIVQAFKDMCY-------NINMRAFHPLKRNELL 226
            ||.:..:..||:.:...|:...:..::| |:...:|.|...|       :|::.    :|.:...
  Fly   203 DFIDTINRWTLESVSVVALDKQLGLLKN-SNKESEALKLFHYLDEFFIVSIDLE----MKPSPWR 262

  Fly   227 YRLAPDYPAYSRTLKTLQDFT----NEIIAKRIEAHKSGAVSTNAGDEFTRKKMAFLDTLLSSTI 287
            |...|......|.|..:|:.|    :|.|.:..:..|.|.|                        
  Fly   263 YIKTPKLKRLMRALDGIQEVTLAYVDEAIERLDKEAKEGVV------------------------ 303

  Fly   288 DGRPLNSKELYE-------EVSTFM-----FEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREV 340
              ||.|.:.:.|       :|:|.|     ..|.|||:|..:..:..|:::.::|.:|.:|..:|
  Fly   304 --RPENEQSVLEKLLKVDRKVATVMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKV 366

  Fly   341 MGNSELGRDATFQEIS--QMKYLDLFIKEAQRVYPSVPFIGRFTEKDYVIDGDLVPKGTTLNLGL 403
            :.|    :::.|.|.|  .:.||...|||:||::|.:....|...:|.|:.|..||.||.:|:..
  Fly   367 LPN----KNSEFTEASMKNVPYLRACIKESQRLHPLIVGNARVLARDAVLSGYRVPAGTYVNIVP 427

  Fly   404 VMLGYNEKVFKDPHKFRPERF--------------ELEKPGPFEYVPFSAGPRNCIGQKFALLEI 454
            :.....::.|....:|.|||:              ||:...||.::||..|||.|:|::...:|:
  Fly   428 LNALTRDEYFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMEL 492

  Fly   455 KTVVSKIIRNFEV---LPALDELVSKDGYISTTIGLPDAERKKRDPYRHKY 502
            :...:::||||.|   .|      :::.:.|..|.||:.      |.:.|:
  Fly   493 ELGTARLIRNFNVEFNYP------TENAFRSALINLPNI------PLKFKF 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_477117.2 CYP4 68..520 CDD:410721 110/491 (22%)
Cyp12a4NP_650783.2 CYP24A1-like 82..528 CDD:410677 116/525 (22%)

Return to query results.
Submit another query.