DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e2 and cyp46a1.2

DIOPT Version :10

Sequence 1:NP_477117.2 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_956755.3 Gene:cyp46a1.2 / 393433 ZFINID:ZDB-GENE-040426-1184 Length:501 Species:Danio rerio


Alignment Length:489 Identity:132/489 - (26%)
Similarity:232/489 - (47%) Gaps:47/489 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WFVLYIFLALPLLLVAYLELSTFRRRRVLNKFNGPRGLP----LMGNAHQMGK----NPSEILDT 58
            |.:..||..|..:..|:|....: ...:..|::...|.|    |:|::..:.|    :.|.|.|.
Zfish     5 WILYIIFYLLSAVFTAFLAYCLY-IHHLHQKYDHIPGPPRDNFLLGHSPSLTKAMYSDDSLIHDL 68

  Fly    59 VFSWWHQYGKDNFVFWIGT--YSNVLVTSSKYLEFILSS----QTLITKSDIYQL-THPWLGLGL 116
            ...|..|||.   |:.|.|  |..::|...:..:.||.|    :...:.|.::.| ...:||.||
Zfish    69 FLQWAEQYGP---VYRINTLHYIAIVVHCPEATKTILMSPKYAKDPFSYSRLFNLFGKRFLGNGL 130

  Fly   117 LTSTGSK-WHKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDNIFDFQEQAHYLTLD 180
            :|:.... |::.|:::.|||..:.|:......:|.|.:.:..|:.:|.........:..:.:|||
Zfish   131 VTAVDHDIWYRQRRIMDPAFSSSYLRSLISTFDEMSERLMDKLEEMANNKTPAVMHDLVNCVTLD 195

  Fly   181 VICDTAMGVSINAMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYPAYSRTLKTLQD 245
            |||..|.||.:|.:..:.|....|. ::|.| .|    .|...:.|:|:.|      :..|.:|.
Zfish   196 VICKVAFGVDLNFLAQKDSPFQNAV-ELCLN-GM----ALDARDPLFRIFP------KNWKLIQQ 248

  Fly   246 FTNEIIAKRIEAHK---SGAVSTNAGDEFTRKKMAFLDTLLSSTIDGRPLNSKELYEEVS----T 303
            ..:..:..|....|   :...:...|::..:..:    |.:....:...:||.|..|::.    |
Zfish   249 IRDAAVLLRKTGEKWIQNRKTAVKNGEDVPKDIL----TQILKIAEEENVNSSEDLEQMMDNFVT 309

  Fly   304 FMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQEISQMKYLDLFIKEA 368
            |...|.:||.:.:|||:..|.|:.:..::...|..||:|..   |:.:.:::.::.||...:||.
Zfish   310 FFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGTK---REISNEDLGKLTYLSQVLKET 371

  Fly   369 QRVYPSVPFIGRFTEKDYVIDGDLVPKGTTLNLGLVMLGYNEKVFKDPHKFRPERFELEKPGPFE 433
            .|:||:.|...|:..:|.:|:|..:|.|.::.....:....||.||||.||.||||:...|.|:.
Zfish   372 LRLYPTAPGTNRWLHEDMIINGIKIPGGCSVMFSSFVSQRLEKFFKDPLKFDPERFDENAPKPYY 436

  Fly   434 -YVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFE 466
             |.||:.|||.|:||.|:.:|.|.|::|:::.||
Zfish   437 CYYPFALGPRTCLGQVFSQMEAKVVLAKLLQRFE 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_477117.2 CYP4 68..520 CDD:410721 113/415 (27%)
cyp46a1.2NP_956755.3 None

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