DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e2 and Cyp4d20

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster


Alignment Length:554 Identity:200/554 - (36%)
Similarity:298/554 - (53%) Gaps:77/554 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWFVLYIFLALPLLLVAYLELSTF----RRRRVL----NKFNGPRGLPLMG---NAHQMGKNPSE 54
            ||..| |..||.|||       |:    :|:|||    :...||..:|::|   .|..:|     
  Fly     1 MWLTL-ITGALILLL-------TWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLG----- 52

  Fly    55 ILDTVFSW----WHQYGKDNFVFWIGTYSNVLVTSSKYLEFILSSQTLITKSDIYQLTHPWLGLG 115
             .:.:..|    :.:||| .|.|||...|.:.....:|.|.||||.||:.|..:|:...|:|..|
  Fly    53 -AENIIGWVGEKFDKYGK-TFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPFLNDG 115

  Fly   116 LLTSTGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDNIFDFQEQAHYLTLD 180
            ||.|||.|||..||:.|.||||.:|:.:.|:|:.:|:..:.:|:.||.|....|..:......||
  Fly   116 LLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALD 180

  Fly   181 VICDTAMGVSINAMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYPAYSRTL----K 241
            ||.:.||||.:||..:.....::|.|.:.|....|.|...:|...|:.||.  |...|.|    :
  Fly   181 VITEAAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWLFPLAA--PLLHRQLLSDIR 243

  Fly   242 TLQDFTNEIIAKRIE----AHKSGA---VSTNAGDEFTRKKMAFLDTLLSSTIDGRPLNSKELYE 299
            .:.|||:::|::|.|    |...|.   :|....:..::.:||.||.||.|:|:.:||:..::.|
  Fly   244 VMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSINNQPLSDADIRE 308

  Fly   300 EVSTFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQEISQMKYLDLF 364
            ||.||||||.|||:||||.|:|.::||.:.|:::|:|.:.|:| .:.....|..::..:||||..
  Fly   309 EVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLG-PDASAPVTQAQLQDLKYLDCV 372

  Fly   365 IKEAQRVYPSVPFIGRFTEKDYVIDGDLVPKGTTLNLGLVMLGYNEKVFKDPHKFRPERF-ELEK 428
            |||..|:||.||.|||..:|:..|....:|..|::.|.|.....:...|.||..|||||| |.::
  Fly   373 IKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLEDQE 437

  Fly   429 PG--PFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTIGLPDAE 491
            .|  .|.||||||||:||||||||:||:|.::||::|.:|:||..:||                 
  Fly   438 QGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGEEL----------------- 485

  Fly   492 RKKRDPYRHKYDPILSAVLTLKSENGLYIRLKER 525
                       .|:|:.:  |:|.:|:.:.|:.|
  Fly   486 -----------KPMLNFI--LRSASGINVGLRPR 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 175/454 (39%)
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 181/498 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449035
Domainoid 1 1.000 101 1.000 Domainoid score I1781
eggNOG 1 0.900 - - E33208_3B9GY
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I1543
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10482at33392
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
109.900

Return to query results.
Submit another query.