DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e2 and cyp26b1

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_997831.1 Gene:cyp26b1 / 324188 ZFINID:ZDB-GENE-030131-2908 Length:511 Species:Danio rerio


Alignment Length:552 Identity:127/552 - (23%)
Similarity:204/552 - (36%) Gaps:110/552 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LALPLLLVAYLELSTFRRRRVLNKF------NGPRGLPLMG-NAHQMGKNPSEILDTVFSWWHQY 66
            :::.|||....:|...|.....:|.      .|..|.|::| ..|               |:.| 
Zfish    20 VSMALLLAVSQQLWQLRWTATRDKSCKLPMPKGSMGFPIIGETCH---------------WFFQ- 68

  Fly    67 GKDNFVFWIGTYSNVL-----------VTSSKYLEFILSSQTLITKSDIYQLTHPWLG-LGLLTS 119
            |..........|.||.           ||.::.:..:|..:..:...|..|.|...|| ..|..|
Zfish    69 GAGFHASRRQKYGNVFKTHLLGRPLIRVTGAENVRKVLMGEHSLVTVDWPQSTSTLLGPNSLANS 133

  Fly   120 TGSKWHKHRKMITPAFHFNILQDF----HEVMNENSTKFIKHLKTVAAGDNIFDFQEQAHYLTLD 180
            .|....|.||:....|....|:.:    .:|:.|.       |:..::..:..:...::..|:.:
Zfish   134 IGDIHRKRRKIFAKVFSHEALESYLPKIQQVIQET-------LRVWSSNPDPINVYRESQRLSFN 191

  Fly   181 VICDTAMGVSINAMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYP--AYSRTLKTL 243
            :.....:|..|  .|.....:...|::...|:              :.|..|.|  .|.:.::. 
Zfish   192 MAVRVLLGFRI--PEEEMHCLFSTFQEFVENV--------------FSLPIDLPFSGYRKGIRA- 239

  Fly   244 QDFTNEIIAKRIE---AHKSGAVSTNAGDEFTRKKMAFLDTLLSSTIDGR-PLNSKELYEEVSTF 304
            :|...:.|.|.|.   .|..|...|:|           ||.||.|..:.. .|..:||.|.....
Zfish   240 RDSLQKSIEKAIREKPLHTQGKDYTDA-----------LDVLLESAKENNTELTMQELKESTIEL 293

  Fly   305 MFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQRE-------VMGNSELGRDATFQEISQMKYLD 362
            :|....||.|..:..|..|.||.....||.:|.|.       .:...||..|:    |..:||||
Zfish   294 IFAAFATTASASTSLVMQLLRHPAVLEKLREELRSCGLLHDGCLCQGELRLDS----IISLKYLD 354

  Fly   363 LFIKEAQRVYPSVPFIGRFTEKDYVIDGDLVPKGTTLNLGLVMLGYNEKVFK-----DPHKFRPE 422
            ..|||..|::..|....|...:.:.:||..||||.::...:........|||     ||.:|.||
Zfish   355 CVIKEVLRLFAPVSGGYRIATQTFELDGVQVPKGWSVMYSIRDTHDTSAVFKDVEAFDPDRFSPE 419

  Fly   423 RFELEKPGPFEYVPFSAGPRNCIGQKFALLEIKTVVSKI---------IRNFEVLPALDELVSKD 478
            |.| ::.|.|.|:||..|.|:|:|::.|.|.:|.:..::         .|.|..:.::..:...|
Zfish   420 RSE-DREGRFHYLPFGGGVRSCLGKQLATLFLKLLAVELAGGSRFELSTRTFPRMISVPVVHPTD 483

  Fly   479 GYISTTIGLPDAERKKRDPYRHKYDPILSAVL 510
            |......||.    ..::....|.|.:|.|.:
Zfish   484 GLRVKFFGLD----SNQNQIMAKSDEMLDATV 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 113/477 (24%)
cyp26b1NP_997831.1 p450 1..489 CDD:299894 121/524 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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