DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e2 and cyp26a1

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio


Alignment Length:495 Identity:113/495 - (22%)
Similarity:192/495 - (38%) Gaps:89/495 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LALPLLL----VAYLELSTFRR-----RRVLNKFNGPRGLPLMG--------------------- 43
            :.||:||    |...|:...||     |..|..  |..|||.:|                     
Zfish    14 IVLPVLLFLAAVKLWEMLMIRRVDPNCRSPLPP--GTMGLPFIGETLQLILQRRKFLRMKRQKYG 76

  Fly    44 ---NAHQMGKNPSEILDTVFSWWHQYGKDNF-VFWIGTYSNVLVTSSKYLEFILSSQTLITKSDI 104
               ..|..| ||     ||    ...|.||. ...:|.:..|.|.....:..||.|.||   |::
Zfish    77 CIYKTHLFG-NP-----TV----RVMGADNVRQILLGEHKLVSVQWPASVRTILGSDTL---SNV 128

  Fly   105 YQLTHPWLGLGLLTSTGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDNIFD 169
            :.:.|               ...:|.|..||..:.|:.:..|:.:.....|:..   ...|:...
Zfish   129 HGVQH---------------KNKKKAIMRAFSRDALEHYIPVIQQEVKSAIQEW---LQKDSCVL 175

  Fly   170 FQEQAHYLTLDVICDTAMGVSINAMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYP 234
            ...:...|...:.....:|.....::.....:|:||::|..|              |:.|..|.|
Zfish   176 VYPEMKKLMFRIAMRILLGFEPEQIKTDEQELVEAFEEMIKN--------------LFSLPIDVP 226

  Fly   235 AYSRTLKTLQDFTNEIIAKRIEAHKSGAVSTNAGDEFTRKKMAFLDTLLSSTIDGRPLNSKELYE 299
             :|...:.|:  ....|..:||.:....:..:..:...:.|.|....:.:|.....|.:.:.:.|
Zfish   227 -FSGLYRGLR--ARNFIHSKIEENIRKKIQDDDNENEQKYKDALQLLIENSRRSDEPFSLQAMKE 288

  Fly   300 EVSTFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQRE--VMGNSELGRDATFQEISQMKYLD 362
            ..:..:|.||:||.|..:..|..|..:.:..:|:.:|.:|  .||....|:..:.:.:.|:||..
Zfish   289 AATELLFGGHETTASTATSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLSMELLDQLKYTG 353

  Fly   363 LFIKEAQRVYPSVPFIGRFTEKDYVIDGDLVPKGTTLNLGLVMLGYNEKVFKDPHKFRPERF--- 424
            ..|||..|:.|.||...|...|.:.::|..:|||..:...:........||.:..:|:||||   
Zfish   354 CVIKETLRINPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADVFPNKDEFQPERFMSK 418

  Fly   425 ELEKPGPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRN 464
            .||....|.|:||..|.|.|:|::||.:.:|..:.::.::
Zfish   419 GLEDGSRFNYIPFGGGSRMCVGKEFAKVLLKIFLVELTQH 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 103/460 (22%)
cyp26a1NP_571221.2 p450 14..487 CDD:299894 113/495 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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