DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e2 and Cyp4a3

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_038965516.1 Gene:Cyp4a3 / 298423 RGDID:631356 Length:511 Species:Rattus norvegicus


Alignment Length:562 Identity:163/562 - (29%)
Similarity:257/562 - (45%) Gaps:115/562 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FVLYIFLALPLLLVAYLELSTFRRR---RVLNKFNGPRGLPLMGNAHQMGKNPSEILDTVFSWWH 64
            |:|.:||.|...:..||     ||:   :.|.||               ...||..|     |.|
  Rat    23 FLLSLFLVLFKAVQFYL-----RRQWLLKALEKF---------------PSTPSHWL-----WGH 62

  Fly    65 QYGKDNF---VFWI------------GTYSNVLVTSSKYLEFILSSQTLITKSD-----IYQLTH 109
            ......|   :.|:            |:.:.||:....|::.:|.      :||     |||...
  Rat    63 DLKDREFQQVLTWVEKFPGACLQWLSGSKTRVLLYDPDYVKVVLG------RSDPKASGIYQFLA 121

  Fly   110 PWL----GLGLLTSTGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDN---I 167
            ||:    |.|||...|.||.:|.:|:|||||:.||:.:.::|.::.:..:...:.:...|:   |
  Rat   122 PWIVSGTGYGLLLLNGKKWFQHWRMLTPAFHYGILKPYVKIMADSVSIMLDKWEKLDDQDHPLEI 186

  Fly   168 FDFQEQAHYLTLDVICDTAMGVSIN-----AMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLY 227
            |      ||::| :..||.|..:.:     .::..|.|..:|.:|:......|.......|.::|
  Rat   187 F------HYVSL-MTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLTFFRVRSAFYGNSIIY 244

  Fly   228 RLAPDYPAYSRTLKTLQDFTNEIIAKRIEAHKSGAVSTNAGDEFTRKK--MAFLDTLLSSTI-DG 289
            .::.|.....|..:...:.|:.:|..|     ...:......:..|||  :.|||.||.:.: ||
  Rat   245 NMSSDGRLSRRACQIAHEHTDGVIKMR-----KAQLQNEEELQKARKKRHLDFLDILLFAKMEDG 304

  Fly   290 RPLNSKELYEEVSTFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQE 354
            :.|:.::|..||.||||||||||.||:|:..|.|:.|.:.|.:..:|.:.::|:   |...|:..
  Rat   305 KSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGD---GTSVTWDH 366

  Fly   355 ISQMKYLDLFIKEAQRVYPSVPFIGRFTEKDYVI-DGDLVPKGTTLNLGLVMLGYNEKVFKDPHK 418
            :.|:.|..:.||||.|:||.||.:.|........ ||..:|||.|..:.:..|.:|...:.:|..
  Rat   367 LDQISYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNPKV 431

  Fly   419 FRPERFELEKP-GPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYIS 482
            |.|.||..:.| ....|:|||.|.|||||::||:.|:|..|:..:..||:||             
  Rat   432 FDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP------------- 483

  Fly   483 TTIGLPDAERKKRDPYRHKYDPILSAVLTLKSENGLYIRLKE 524
                         ||.|   .|:..|.|.|||:||:::|||:
  Rat   484 -------------DPTR---IPVPMARLVLKSKNGIHLRLKK 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 135/470 (29%)
Cyp4a3XP_038965516.1 CYP4B-like 69..506 CDD:410771 143/486 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348469
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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