DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e2 and Cyp4f18

DIOPT Version :10

Sequence 1:NP_477117.2 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001028858.2 Gene:Cyp4f18 / 290623 RGDID:1305261 Length:524 Species:Rattus norvegicus


Alignment Length:550 Identity:157/550 - (28%)
Similarity:263/550 - (47%) Gaps:79/550 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WFVLYIFLALPLLLVAYL---ELSTFRRRRVLNKFNGPRGLP----LMGN-----AHQMGKNPSE 54
            |.:|.:..|..||  ||:   ..:.|...|.|.:|..|   |    |.|:     :.:.|....:
  Rat    19 WLLLLLVGASCLL--AYILPQVYAVFENSRRLRRFPQP---PTRNWLFGHLGLIQSSEEGLLYIQ 78

  Fly    55 ILDTVFSWWHQYGKDNFVFWIGTYSNVL-VTSSKYLEFILSSQTLITKSD--IYQLTHPWLGLGL 116
            .|...|       :|...:|:|.:..|: :....:::.::.:...:...|  .|:...||||.||
  Rat    79 SLSRTF-------RDVCCWWVGPWHPVIRIFHPAFIKPVILAPASVAPKDRVFYRFLKPWLGDGL 136

  Fly   117 LTSTGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLK---TVAAGDNIFDFQEQAHYLT 178
            |.|||.||.:||.|:|||||||||:.:.::.|:::.  |.|.|   ..:.|....|..|....:|
  Rat   137 LLSTGDKWSRHRHMLTPAFHFNILKPYVKIFNDSTN--IMHAKWQRLASQGSARLDMFEHISLMT 199

  Fly   179 LDVICDTAMGVSINAMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYPAYSRTLKTL 243
            ||.:.........|..| :.|..:.|..::...:..|....|...:|.|.|..|...:.:..:.:
  Rat   200 LDSLQKCVFSFDSNCQE-KPSEYITAILELSALVARRHQSLLLYVDLFYHLTRDGMRFRKACRLV 263

  Fly   244 QDFTNEIIAKRIEAHKSGAVSTNAGDEFTR-----KKMAFLDTLLSSTID-GRPLNSKELYEEVS 302
            .|||:.:|.:|     ...:....||:..:     |.:.|:|.||.|..: |..|:.:::..|..
  Rat   264 HDFTDAVIRER-----RRTLPDQGGDDALKAKAKAKTLDFIDVLLLSKDEHGEALSDEDIRAEAD 323

  Fly   303 TFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQEISQMKYLDLFIKE 367
            ||||.|||||.||:|:.:|.|::|.:.|.:..:|.||::.:.| ..:..:.:::|:.:|.:.|||
  Rat   324 TFMFGGHDTTASGLSWILYNLAKHPEYQERCRQEVRELLRDRE-PEEIEWDDLAQLPFLTMCIKE 387

  Fly   368 AQRVYPSVPFIGRFTEKDYVI-DGDLVPKGTTLNLGLVMLGYNEKVFKDPHKFRPERFEL---EK 428
            :.|::|....|.|...:|.:: ||.::|||....:.:....:|..|:.||..:.|.||:.   |.
  Rat   388 SLRLHPPATAISRCCTQDIMLPDGRVIPKGVICRISIFGTHHNPAVWPDPEVYNPFRFDADNGEG 452

  Fly   429 PGPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTIGLPDAERK 493
            ..|..::||||||||||||.||:.|:|..::..:..|.|                   |||.:..
  Rat   453 RSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRV-------------------LPDDKEP 498

  Fly   494 KRDPYRHKYDPILSAVLTLKSENGLYIRLK 523
            :|.|           .|.|::|.||::|::
  Rat   499 RRKP-----------ELILRAEGGLWLRVE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_477117.2 CYP4 68..520 CDD:410721 138/467 (30%)
Cyp4f18NP_001028858.2 CYP4F 74..515 CDD:410772 140/486 (29%)

Return to query results.
Submit another query.