DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e2 and Cyp4a2

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_038965182.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:517 Species:Rattus norvegicus


Alignment Length:563 Identity:162/563 - (28%)
Similarity:258/563 - (45%) Gaps:111/563 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FVLYIFLALPLLLVAYLELSTFRRR---RVLNKFNGPRGLPLMGNAHQMGKNPSEILDTVFSWWH 64
            |:|.:||.|...:..||     ||:   :.|.||               ...||..|     |.|
  Rat    23 FLLSLFLVLFKAVQFYL-----RRQWLLKALEKF---------------PSTPSHWL-----WGH 62

  Fly    65 QYGKDNF---VFWI------------GTYSNVLVTSSKYLEFILSSQTLITKSD--IYQLTHPWL 112
            ......|   :.|:            |:.:.||:....|::.:|.      :||  .||...||:
  Rat    63 NLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLG------RSDPKPYQSLAPWI 121

  Fly   113 GLGLLTSTGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDN---IFDFQEQA 174
            |.|||...|.||.:||:|:|||||::||:.:.::|.::.:..:...:.:...|:   ||      
  Rat   122 GYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIF------ 180

  Fly   175 HYLTLDVICDTAMGVSIN-----AMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYP 234
            ||::| :..||.|..:.:     .::..|.|..:|.:|:...|..|.......|.::|.::.|..
  Rat   181 HYVSL-MTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGR 244

  Fly   235 AYSRTLKTLQDFTNEI-IAKRIEAHKSGAVSTNAGD-------EFTRKK--MAFLDTLLSSTI-D 288
            ...|..:...:.|..: :.....:...|.:.|....       :..|||  :.|||.||.:.: |
  Rat   245 LSRRACQIAHEHTGSVFLLPAFLSLSDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMED 309

  Fly   289 GRPLNSKELYEEVSTFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQ 353
            |:.|:.::|..||.||||||||||.||:|:..|.|:.|.:.|.:..:|.:.::|:   |...|:.
  Rat   310 GKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGD---GTSVTWD 371

  Fly   354 EISQMKYLDLFIKEAQRVYPSVPFIGRFTEKDYVI-DGDLVPKGTTLNLGLVMLGYNEKVFKDPH 417
            .:.||.|..:.||||.|:|..||.:.|........ ||..:|||..:.:.:..|.:|...:.:|.
  Rat   372 HLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPK 436

  Fly   418 KFRPERFELEKP-GPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYI 481
            .|.|.||..:.| ....|:|||.|.|||||::||:.|:|..|:..:..||:||            
  Rat   437 VFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP------------ 489

  Fly   482 STTIGLPDAERKKRDPYRHKYDPILSAVLTLKSENGLYIRLKE 524
                          ||.|   .|:....|.|||:||:::|||:
  Rat   490 --------------DPTR---IPVPMPRLVLKSKNGIHLRLKK 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 135/471 (29%)
Cyp4a2XP_038965182.1 CYP4B-like 69..512 CDD:410771 142/487 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348481
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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