DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e2 and Cyp4a2

DIOPT Version :10

Sequence 1:NP_477117.2 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001038235.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:504 Species:Rattus norvegicus


Alignment Length:555 Identity:162/555 - (29%)
Similarity:257/555 - (46%) Gaps:108/555 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FVLYIFLALPLLLVAYLELSTFRRR---RVLNKFNGPRGLPLMGNAHQMGKNPSEILDTVFSWWH 64
            |:|.:||.|...:..||     ||:   :.|.||               ...||..|     |.|
  Rat    23 FLLSLFLVLFKAVQFYL-----RRQWLLKALEKF---------------PSTPSHWL-----WGH 62

  Fly    65 QYGKDNF---VFWI------------GTYSNVLVTSSKYLEFILSSQTLITKSD--IYQLTHPWL 112
            ......|   :.|:            |:.:.||:....|::.:|.      :||  .||...||:
  Rat    63 NLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLG------RSDPKPYQSLAPWI 121

  Fly   113 GLGLLTSTGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDN---IFDFQEQA 174
            |.|||...|.||.:||:|:|||||::||:.:.::|.::.:..:...:.:...|:   ||      
  Rat   122 GYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIF------ 180

  Fly   175 HYLTLDVICDTAMGVSIN-----AMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYP 234
            ||::| :..||.|..:.:     .::..|.|..:|.:|:...|..|.......|.::|.::.|..
  Rat   181 HYVSL-MTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGR 244

  Fly   235 AYSRTLKTLQDFTNEIIAKRIEAHKSGAVSTNAGDEFTRKK--MAFLDTLLSSTI-DGRPLNSKE 296
            ...|..:...:.|:.:|..|     ...:......:..|||  :.|||.||.:.: ||:.|:.::
  Rat   245 LSRRACQIAHEHTDGVIKTR-----KAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDED 304

  Fly   297 LYEEVSTFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQEISQMKYL 361
            |..||.||||||||||.||:|:..|.|:.|.:.|.:..:|.:.::|:   |...|:..:.||.|.
  Rat   305 LRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGD---GTSVTWDHLDQMPYT 366

  Fly   362 DLFIKEAQRVYPSVPFIGRFTEKDYVI-DGDLVPKGTTLNLGLVMLGYNEKVFKDPHKFRPERFE 425
            .:.||||.|:|..||.:.|........ ||..:|||..:.:.:..|.:|...:.:|..|.|.||.
  Rat   367 TMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFS 431

  Fly   426 LEKP-GPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTIGLPD 489
            .:.| ....|:|||.|.|||||::||:.|:|..|:..:..||:||                    
  Rat   432 PDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP-------------------- 476

  Fly   490 AERKKRDPYRHKYDPILSAVLTLKSENGLYIRLKE 524
                  ||.|   .|:....|.|||:||:::|||:
  Rat   477 ------DPTR---IPVPMPRLVLKSKNGIHLRLKK 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_477117.2 CYP4 68..520 CDD:410721 142/481 (30%)
Cyp4a2NP_001038235.1 CYP4B-like 69..499 CDD:410771 142/479 (30%)

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