DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e2 and cyp-13A1

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:536 Identity:131/536 - (24%)
Similarity:227/536 - (42%) Gaps:126/536 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WFVLY--IFLALPLLLVAYLELSTF-RRRRVLNKFNGPRGLPLMG---NAHQMGKNPSEILDTVF 60
            ||..:  ||:|   :...|:...|| |||.|:    ||.|.|::|   |:          ||..|
 Worm     5 WFPWFSAIFVA---VFSYYIWQWTFWRRRGVV----GPMGFPVLGVFLNS----------LDNNF 52

  Fly    61 -------SWWHQYGKDNFVFWIGTYSNVLVTSSKYLEFILSSQTLITKSDIY--QLTHPWLG--- 113
                   .|..::|| .:.|..||...::::..:     |..:..:|:.|.:  :..:|..|   
 Worm    53 PFPLQCREWTKKFGK-IYGFTEGTLKTLVISDPE-----LVHEVFVTQYDNFYGRKRNPIQGDSE 111

  Fly   114 ----LGLLTSTGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDNIFDFQEQA 174
                ..|..:.|.:|.:.|.:.:|.|..:.|:..::.:.:::.:.::|::..:||....|..:..
 Worm   112 KEKRTNLFAAQGFRWKRLRAISSPTFSNSSLRKLYQTVEDSALELLRHIEKQSAGGKQIDMLKFY 176

  Fly   175 HYLTLDVICDTAMGVSINAMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYPAY--- 236
            ...|||||...|||.:.:          |.||:....|..:.|.  .....|:.:...:|.:   
 Worm   177 QEFTLDVIGRIAMGQTDS----------QMFKNPIMPIVSKLFQ--GNFAKLFLIGGIFPTFLVE 229

  Fly   237 ------SRTLKT-----LQDFTNEIIAKRI----EAHKSGAVSTNAGDEFTRKKMAFLDTLL--- 283
                  .:.||.     :.:.|.:.|..||    |..|:|.......|        |:|..|   
 Worm   230 IIRQILLKNLKVGSFRKINEITLDAIHNRIKQREEDQKNGIEIGEPAD--------FIDLFLDAK 286

  Fly   284 ----------------SSTIDGRPLNSKELYEEVSTFMFEGHDTTTSGVSFAVYLLSRHQDEQRK 332
                            |:|...|.|.::|:..:.:.|:..|.|||...:|:|.|||:.|.:.|:|
 Worm   287 AEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKK 351

  Fly   333 LFKEQREVMGNSELGRDATFQEISQMKYLDLFIKEAQRVYPSVPFIGRFTE-----KDYVIDGDL 392
            |.:|......|.|:    |..::|::||::...|||.|:||    :|.|..     ::..:....
 Worm   352 LQEEVNRECPNPEV----TIDQLSKLKYMECVFKEALRLYP----LGAFANSRRCMRNTKLGNMK 408

  Fly   393 VPKGTTLNLGLVMLGYNEKVF-KDPHKFRPERFE-------LEKPGPFEYVPFSAGPRNCIGQKF 449
            |..||.:.:....|..:..:: .|...|:|||::       .:|.|   |:||..|||.|||.:.
 Worm   409 VEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSG---YIPFGLGPRQCIGMRL 470

  Fly   450 ALLEIKTVVSKIIRNF 465
            |.:|.|.::..|:|.|
 Worm   471 AYMEEKILLVHILRKF 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 119/500 (24%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 109/460 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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