DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e2 and cyp-13A4

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_496111.1 Gene:cyp-13A4 / 188355 WormBaseID:WBGene00011671 Length:520 Species:Caenorhabditis elegans


Alignment Length:500 Identity:127/500 - (25%)
Similarity:223/500 - (44%) Gaps:79/500 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LVAYLELSTFRRRRVLNKFNGPRGLPLMG---NAHQMGKNPSEILDTVFSWWHQYGKDNFVFWI- 75
            |..|:.:.:|..|:.:   .||||.|..|   ..|.. :||.  |..:..|..:||.   ::.| 
 Worm    16 LTYYIWIWSFWIRKGV---KGPRGFPFFGVILKFHDY-ENPG--LLKLGEWTKKYGS---IYGIT 71

  Fly    76 -GTYSNVLVTSSKYLEFILSSQTLITKSDIY-QLTHPWLG-------LGLLTSTGSKWHKHRKMI 131
             |....::|::.:::..:...|.    .:.| :.|:|..|       ..|:.:.|.:|.:.|.:.
 Worm    72 EGVEKTLVVSNPEFVHEVFVKQF----DNFYGRKTNPIQGDPNKNKRAHLVLAQGHRWKRLRTLA 132

  Fly   132 TPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDNIFDFQEQAHYLTLDVICDTAMGVSINAMEN 196
            :|.|....|:.....:.|...:.::||...:|.....|..:.....|||:|...|||.:.:.|..
 Worm   133 SPTFSNKSLRKIMSTVEETVVELMRHLDEASAKGKAVDLLDYYQEFTLDIIGRIAMGQTESLMFR 197

  Fly   197 RS--SSIVQAFK---DMCYNINMRAFHPLKRNELLYRLAPDYPAYSRT---LKTLQDFTNEIIAK 253
            ..  ..:.:.||   .|.:.|  ....|: ...|:.:|...:|.:|..   :.|::...|    |
 Worm   198 NPMLPKVKEIFKKGGKMPFLI--AGVFPI-AGTLMRQLFMKFPKFSPAFGIMNTMEKALN----K 255

  Fly   254 RIEAHKSGAVSTNAGDEFTRKKMAFLDTLL-----------SSTID---------GRPLNSKELY 298
            |:|..   |....||.|.:.:...|:|..|           .||:.         .:.|...|:.
 Worm   256 RLEQR---AADKKAGIEPSGEPQDFIDLFLDARANVDFIEEESTLGFAKSEVLKVDKHLTFDEII 317

  Fly   299 EEVSTFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQEISQMKYLDL 363
            .::..|:..|:|||...:|::.|||:.|.:.|:||.:|......:.|:    ||.:||::||::.
 Worm   318 GQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPDPEV----TFDQISKLKYMEC 378

  Fly   364 FIKEAQRVYPSVPFI-GRFTEKDYVIDGDLVPKGTTLNLGLVMLGYNEKVF-KDPHKFRPERFE- 425
            .:|||.|:||....: .|...|...:.|..:.:||.:.:....|.|:.||: .|..:|:|||:| 
 Worm   379 VVKEALRMYPLASLVHNRKCMKKTNVLGVEIDEGTNVQVDTWTLHYDPKVWGDDASEFKPERWET 443

  Fly   426 -----LEKPGPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNF 465
                 ..|.|   |:||..|||.|||.:.|::|.|.:::.|::.:
 Worm   444 GDELFYAKGG---YLPFGMGPRICIGMRLAMMEEKLLLTHILKKY 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 123/479 (26%)
cyp-13A4NP_496111.1 p450 33..514 CDD:278495 123/479 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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