DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e2 and cyp4b1

DIOPT Version :9

Sequence 1:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001120073.1 Gene:cyp4b1 / 100145080 XenbaseID:XB-GENE-5924259 Length:510 Species:Xenopus tropicalis


Alignment Length:538 Identity:157/538 - (29%)
Similarity:271/538 - (50%) Gaps:57/538 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWFVL-------YIFLALPLLLVAYLELSTFRRRRVLNKFNGPRGLPLMGNAHQMGKNPSEILDT 58
            ||..|       .:.|...||....|.||..|:..:..:|.||....|:||..|:.::..: ||.
 Frog    10 MWNTLVWQQVAALLCLLAVLLKATQLYLSQKRQENIFKQFPGPPRHWLLGNVDQIRRDGKD-LDL 73

  Fly    59 VFSWWHQYGKDNFVFWIGTYSNVL-VTSSKYLEFILSSQTLITKSDI-YQLTHPWLGLGLLTSTG 121
            :.:|.|:.| ..|..|.|.:|:.| :|...|.:.|...:.  .||.| |....||:|.|||..||
 Frog    74 LVNWTHKNG-GAFPVWFGNFSSFLFLTHPDYAKVIFGREE--PKSSISYDFLVPWIGKGLLVLTG 135

  Fly   122 SKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDNIFDFQEQAHYLTLDVICDTA 186
            .||.:||:::||.||:::|:.:..::::.:|..:.:.:.:.......:..:....:|||.|...|
 Frog   136 PKWFQHRRLLTPGFHYDVLKPYVNLISKCTTDMLDNWEKLITKQKTVELFQHLSLMTLDSIMKCA 200

  Fly   187 MGVSINAMENRSSSIVQAFKDMCY--NINMRAFHPLKRNELLYRLAPDYPAYSRTLKTLQDFTNE 249
            .....|..::.:::.::|..|:.|  |:.:|.| |. .|:.::.|:|....:.:..:...:.|::
 Frog   201 FSYDSNCQKDSNNAYIKAVFDLSYVANLRLRCF-PY-HNDTVFYLSPHGYRFRKACRITHEHTDK 263

  Fly   250 IIAKRIEAHKSGAVSTNAGDEFTRKKMAFLDTLLSSTID-GRPLNSKELYEEVSTFMFEGHDTTT 313
            :|.:|.|:.|   :.........::.:.|||.||.:..: |..|:..:|..||.||||||||||.
 Frog   264 VIQQRKESMK---LEKELEKIQQKRHLDFLDILLFARDEKGHGLSDDDLRAEVDTFMFEGHDTTA 325

  Fly   314 SGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQEISQMKYLDLFIKEAQRVYPSVPFI 378
            ||:|:.:|.::::.:.|:|..:|.:||:|:.::   ..::::.::.|.::.|||:.|:||.||.:
 Frog   326 SGISWILYCMAKYPEHQQKCREEIKEVLGDRQI---MEWEDLGKIPYTNMCIKESLRMYPPVPGV 387

  Fly   379 GRFTEKDYV-IDGDLVPKGTTLNLGLVMLGYNEKVFKDPHKFRPERFELEKPG---PFEYVPFSA 439
            .|....... .||..||.||.:.|.:..:..|..|::||..|.|.||..|...   ...::||:|
 Frog   388 ARQLRNPVTFFDGRSVPAGTLIGLSIYAIHKNPAVWEDPEVFNPLRFSPENSANRHSHAFLPFAA 452

  Fly   440 GPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTIGLPDAERKKRDPYRHKYDP 504
            ||||||||.||:.|:|..|:..:..|.:.|.|:.                             .|
 Frog   453 GPRNCIGQNFAMNEMKVAVALTLNRFHLAPDLEN-----------------------------PP 488

  Fly   505 ILSAVLTLKSENGLYIRL 522
            |....|.|||:||:::.|
 Frog   489 IKIPQLVLKSKNGIHVHL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 135/442 (31%)
cyp4b1NP_001120073.1 p450 50..503 CDD:278495 145/493 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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