DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ad1 and CYP86A4

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_171666.1 Gene:CYP86A4 / 839347 AraportID:AT1G01600 Length:554 Species:Arabidopsis thaliana


Alignment Length:579 Identity:133/579 - (22%)
Similarity:237/579 - (40%) Gaps:137/579 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIAIAIILATILVFKGVRIFNYIDHMAGIMEMIPGPTPYPFVGNLFQFGLKPAEYPKKVLQYCRK 67
            ::.:||:....|.||            .|...:.||..:|.:|:|          |..:.|..|.
plant     7 MLLVAIVTGYWLWFK------------RISRWLKGPRVWPLLGSL----------PGLIEQRDRM 49

  Fly    68 YDF--QGFR-----------SLVFLQYHMML----SDPAEIQNILSSSSLLYKE--HLYSFLRPW 113
            :::  :..|           ::.||.....|    .||..::::|.:....|.:  ...|.....
plant    50 HEWITENLRACGGTYQTCIFAVPFLAKKQGLVTVTCDPKNLEHMLKTRFDNYPKGPTWQSVFHDL 114

  Fly   114 LGDGLLTSSGARWLKHQKLYAPAFERSAIEGYLRVVHRTGGQFVQK---------LDVLSDTQEV 169
            ||.|:..|.|..||..:|       .:|:|...|.:.:..|::|.:         |....|..|.
plant   115 LGQGIFNSDGDTWLFQRK-------TAALEFTTRTLRQAMGRWVNRGIKLRFCPILATAQDNAEP 172

  Fly   170 FDAQELVAKCTLDIVCENATGQDSSSL------NGETSDLHGAIKDLCDVVQERTFS--IVKRFD 226
            .|.|:|:.:.|.|.:|..|.|:|:.:.      ||..|..        |...|.:..  |:.:| 
plant   173 VDLQDLILRLTFDNICGLAFGKDTRTCAPGLPENGFASAF--------DRATEASLQRFIIPKF- 228

  Fly   227 ALFRLTSYY-----MKQRRALSLLRSELNRIISQRRHQLAAE---NTCQQGQPINKPFLDVLLTA 283
             :::|..:.     :...|:|..:...|..:|:.|:.:|.::   .|.|:...:...|:      
plant   229 -MWKLKKWLGLGLEVSLSRSLGEIDEYLAAVINTRKQELMSQQESGTHQRHDDLLSRFM------ 286

  Fly   284 KLDGKVLKERE-----IIEEVS-TFIFTGHDPIAAAISFTLYTLSRHSEIQQKAAEEQRRIFGEN 342
                  :|:.|     .::.|: .||..|.|..:.|:|:..:.::.|..::.|...|...:..|.
plant   287 ------MKKTESYSDTFLQHVALNFILAGRDTSSVALSWFFWLITMHPTVEDKIVREICSVLIET 345

  Fly   343 FAGEADLA----------RLDQMHYLELIIRETLRLYPSVPLIARTNRNPIDI--NGTKVAKCTT 395
             .|..|:|          .:|::.||:..|.||||||||||..::...|. |:  :||.|...::
plant   346 -RGTDDVASWTEEPLGFDEIDRLVYLKAAISETLRLYPSVPEDSKHVEND-DVLPDGTFVPAGSS 408

  Fly   396 VIMCLIAMGYNEKYFDDPC-TFRPERFENPTGN--VGIEAFKSVPFSAGPRRCIAEKFAMYQMKA 457
            |...:.|.|..:..:.:.| .|.|||:.:|...  :..:.::.|.|:||||.|:.:..|..|||.
plant   409 VTYSIYAAGRMKSTWGEDCLEFNPERWISPIDGKFINHDQYRFVAFNAGPRICLGKDLAYLQMKT 473

  Fly   458 LLSQLLRRFEILPAVDGLPPGINDHSREDCVPQSEYDPVLNIRVTLKSENGIQIRLRKR 516
            :.:.:|.|..:.     :.||   |..|.           .:.:||..:||:.:.|.||
plant   474 IAAAVLLRHRLT-----VVPG---HKVEQ-----------KMSLTLFMKNGLLVNLYKR 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 116/498 (23%)
CYP86A4NP_171666.1 PLN03195 5..513 CDD:215627 131/577 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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