DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4ad1 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001027517.1 Gene:cyp46a1.3 / 613109 XenbaseID:XB-GENE-969052 Length:504 Species:Xenopus tropicalis


Alignment Length:547 Identity:139/547 - (25%)
Similarity:241/547 - (44%) Gaps:96/547 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIAIAIILATILVFKGVRIFNYIDHMAGIMEMIPGPTPYPFV------------GNLFQFGLKPA 55
            |:.:|:||...|:|.|     ||.::....:.||||....|.            .||..:     
 Frog    12 LLLLALILICFLLFSG-----YIHYIHMKYDHIPGPPRDSFFLGHSPTMLRLMKNNLLMY----- 66

  Fly    56 EYPKKVLQYCRKYD----FQGFRSLVFLQYHMMLSDPAEIQNILSSSSLLYKEHLYSFLR----- 111
               ...|.:.:||.    ..|...::.|     :..|..::.:|.|.. ..|:..|..:.     
 Frog    67 ---DHFLGWVQKYGPVVRINGLHRVIIL-----VVSPEAVKELLMSPK-YSKDKFYDVIANMFGV 122

  Fly   112 PWLGDGLLTSSG-ARWLKHQKLYAPAFERSAIEGYLRVVHRTGGQFVQKLDVLSDTQEVFDAQEL 175
            .::|.||:|... ..|.|.:::..|||.|:.:.|.:...:....:.::||...:|.:......::
 Frog   123 RFMGKGLVTDRDYDHWHKQRRIMDPAFSRTYLMGLMGPFNEKAEELMEKLMEKADGKCEIKMHDM 187

  Fly   176 VAKCTLDIVCENATGQDSSSLNGETSDLHGAIK-DLCDVVQERT----FSIVKRFDALFRLTSYY 235
            :::.|||::.:.|.|.:.:|||.:.:....||. .:..:|:.|.    :|:.||        .:.
 Frog   188 LSRLTLDVIGKVAFGMELNSLNDDLTPFPKAISLVMKGIVEMRNPMVRYSLAKR--------GFI 244

  Fly   236 MKQRRALSLLRSELNRIISQRRHQLAAENTCQQGQ--PINKPFLDVLLTAKLDGKVLKER---EI 295
            .|.:.::.|||......|.:|:.|:      |.|:  |::      :||..|.|..::|.   ||
 Frog   245 RKVQESIRLLRQTGKECIERRQKQI------QDGEEIPVD------ILTQILKGAAMEEECDPEI 297

  Fly   296 -IEEVSTFIFTGHDPIAAAISFTLYTLSRHSEIQQKAAEEQRRIFGENFAGEADLARLDQMHYLE 359
             ::...||...|.:..|..:||.:..|.|:.||.:||..|...:.|..  .:.:...|.::.||.
 Frog   298 LLDNFVTFFIAGQETTANQLSFVVMELGRNPEILEKAQAEIDEVIGSK--RDIEYEDLGKLQYLS 360

  Fly   360 LIIRETLRLYPSVPLIARTNRNPIDINGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERFENP 424
            .:::|||||||:.|..:|.....:.|:|.||.:..|:::....||..|:|:.||.||.|:||...
 Frog   361 QVLKETLRLYPTAPGTSRGLTEDMVIDGVKVPENVTIMLNSYIMGRMEQYYSDPLTFNPDRFSPD 425

  Fly   425 TGNVGIEAFKSVPFSAGPRRCIAEKFAMYQMKALLSQLLRRFEILPAVDGLPPGINDHSREDCVP 489
            ........|   |||.|||.||.:.|:..:.|.::::||:|:| ....:|....|.|..      
 Frog   426 APKPYYSYF---PFSLGPRSCIGQVFSQMEAKVVMAKLLQRYE-FELAEGQSFKILDTG------ 480

  Fly   490 QSEYDPVLNIRVTLKSENGIQIRLRKR 516
                        ||:..:|:..|||.|
 Frog   481 ------------TLRPLDGVICRLRPR 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 119/466 (26%)
cyp46a1.3NP_001027517.1 p450 40..491 CDD:306555 125/508 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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