DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4ad1 and cyp3c4

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001071016.1 Gene:cyp3c4 / 558541 ZFINID:ZDB-GENE-060929-96 Length:507 Species:Danio rerio


Alignment Length:545 Identity:118/545 - (21%)
Similarity:225/545 - (41%) Gaps:93/545 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IILATILVFKGVRIFNYIDHMAGIMEMIPGPTPYPFVGNLFQFGLKPAEYPKKVLQYCRKYD--- 69
            ::|...|:|    |:....|...|...||||.|:||||.|..:......:.   ::..:||.   
Zfish    14 VVLVITLLF----IYGVWPHRFFIKLGIPGPRPWPFVGTLLSYAKGLCNFD---MECAKKYGKVW 71

  Fly    70 --FQGFRSLVFLQYHMMLSDPAEIQNILSS---SSLLYKEHLYSFLRPWLGDGLLTSSGARWLKH 129
              :.|...:      :|::|...|:.:|..   |:.:.:....:.|.....||::.....||.:.
Zfish    72 GIYDGRLPI------LMVADLEVIKVVLVKECYSNFINRRKRTTGLAGPFSDGIIMVKDERWKRM 130

  Fly   130 QKLYAPAFERSAIEGYLRVVHRTGGQFVQKLDVLSDTQEVFDAQELVAKCTLDIVCENATGQDSS 194
            :...:|.|....::....:......:|::.:. ..|.::....:|:||..:||::..::...|..
Zfish   131 RSTLSPYFTSGRLKEIFPIAMTHADRFIKNMQ-KKDPEQPVKIKEVVAPYSLDVITSSSFSVDID 194

  Fly   195 SLNGETSDLHGAIKDLCDVVQERTFSIVKRFDALFRLTSYY-------------MKQRRALSLLR 246
            |:|......         |:..:.|.....|:.|..|...:             :..:.|:....
Zfish   195 SINNPEDPF---------VINVKKFIQFNMFNPLLLLILLFPSLAIPLKKMGVTLFSKSAMDFFY 250

  Fly   247 SELNRIISQRRHQLAAENTCQQGQPINKPFLDVLL-------------TAKLDGKVLKEREIIEE 298
            |.|.:|  :..|...:|....        ||.::|             |::...|.|.:.||:.:
Zfish   251 SVLKKI--KDDHNKESEGRVD--------FLKLMLQNQIPDDQIQDSDTSEQPAKGLTDHEILSQ 305

  Fly   299 VSTFIFTGHDPIAAAISFTLYTLSRHSEIQQKAAEEQRRIFGENFAGEADLA--RLDQMHYLELI 361
            ...||..|::..:..::|.||.|:.:.:..:|..||    ..:||..:..:.  .|.:|.|||:.
Zfish   306 SLVFILGGYETTSTTLTFLLYNLATNPDCLEKLVEE----IDKNFPLDTPITYDALMRMDYLEMA 366

  Fly   362 IRETLRLYPSVPLIARTNRNPIDINGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERFENPTG 426
            |.|::||.|:.|.:.|:.:..:.|||..:.:.|.|.:....:.::...::.|..|||||| :|..
Zfish   367 INESMRLLPTAPRLERSAKKTVVINGLTIPEGTLVGIPTYVLSHDPDIWESPGEFRPERF-SPEN 430

  Fly   427 NVGIEAFKSVPFSAGPRRCIAEKFAMYQMKALLSQLLRRFEILPAVDGLPPGINDHSREDCVPQS 491
            ......:..:||..|||.||..::|:..||..:.:||:.|.:            :..:|..:|  
Zfish   431 KSEFLQYAFIPFGLGPRNCIGMRYAVMIMKLFVVKLLQNFSV------------ETCKETQIP-- 481

  Fly   492 EYDPVLNIRVTLKSENGIQIRLRKR 516
                 |.:.||.:.:..|.::|..|
Zfish   482 -----LEMNVTFQPKVPITLKLIPR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 103/469 (22%)
cyp3c4NP_001071016.1 p450 38..485 CDD:278495 106/499 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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