DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4ad1 and Cyp4a1

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_787031.1 Gene:Cyp4a1 / 50549 RGDID:68945 Length:509 Species:Rattus norvegicus


Alignment Length:538 Identity:144/538 - (26%)
Similarity:248/538 - (46%) Gaps:72/538 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FLIAIAIILATILVFKGVRIFNYIDHMAGIMEMIPGPTPYPFVGNLFQFGLK------------P 54
            ||...:::...:|:.|.|:.:.....:....:..|.|..:.|.|:....|.|            |
  Rat    18 FLQVASVLGLLLLLVKAVQFYLQRQWLLKAFQQFPSPPFHWFFGHKQFQGDKELQQIMTCVENFP 82

  Fly    55 AEYPKKVLQYCRKYDFQGFRSLVFLQYHMMLSDPAEIQNILSSSSLLYKEHLYSFLRPWLGDGLL 119
            :.:|:.         |.|.::      ::::.||..::.||..|. .....:|..|.||:|.|||
  Rat    83 SAFPRW---------FWGSKA------YLIVYDPDYMKVILGRSD-PKANGVYRLLAPWIGYGLL 131

  Fly   120 TSSGARWLKHQKLYAPAFERSAIEGYLRVVHRTGGQFVQKLDVLSDTQEVFDAQELVAKCTLDIV 184
            ..:|..|.:|:::..|||....::.|::.:..:....:.|.:.|:......:..:.::..|||.|
  Rat   132 LLNGQPWFQHRRMLTPAFHYDILKPYVKNMADSIRLMLDKWEQLAGQDSSIEIFQHISLMTLDTV 196

  Fly   185 CENATGQDSS-SLNGETSDLHGAIKDLCDVVQERTFSIVKRFDALFRLTSYYMKQRRALSLLRSE 248
            .:.|...:.| .::|.......||.:|.|:...|..:|..:.|.::..:|......||..|....
  Rat   197 MKCAFSHNGSVQVDGNYKSYIQAIGNLNDLFHSRVRNIFHQNDTIYNFSSNGHLFNRACQLAHDH 261

  Fly   249 LNRIISQRRHQLAAENTCQQGQPINK-------PFLDVLLTAKLD-GKVLKEREIIEEVSTFIFT 305
            .:.:|..|:.||      |....:.|       .|||:||.|::: |..|.::::..||.||:|.
  Rat   262 TDGVIKLRKDQL------QNAGELEKVKKKRRLDFLDILLLARMENGDSLSDKDLRAEVDTFMFE 320

  Fly   306 GHDPIAAAISFTLYTLSRHSEIQQKAAEEQRRIFGENFAGEADLARLDQMHYLELIIRETLRLYP 370
            |||..|:.:|:..|.|:.|.|.||:..||.:.:.|:..:...|  .|||:.|..:.|:|.|||||
  Rat   321 GHDTTASGVSWIFYALATHPEHQQRCREEVQSVLGDGSSITWD--HLDQIPYTTMCIKEALRLYP 383

  Fly   371 SVPLIARTNRNPIDI-NGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERF--ENPTGNVGIEA 432
            .||.|.|.....:.. :|..:.|...|.:.:..:.:|.|.:.:|..|.|.||  ::|.     .:
  Rat   384 PVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEVFDPSRFAPDSPR-----HS 443

  Fly   433 FKSVPFSAGPRRCIAEKFAMYQMKALLSQLLRRFEILPAVDGLPPGINDHSREDCVPQSEYDPVL 497
            ...:|||.|.|.||.::|||.:||.:::..|.|||:||....:|           :|..      
  Rat   444 HSFLPFSGGARNCIGKQFAMSEMKVIVALTLLRFELLPDPTKVP-----------IPLP------ 491

  Fly   498 NIRVTLKSENGIQIRLRK 515
              |:.|||:|||.:.|:|
  Rat   492 --RLVLKSKNGIYLYLKK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 126/457 (28%)
Cyp4a1NP_787031.1 p450 52..503 CDD:278495 137/498 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348532
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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