DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ad1 and Cyp4c3

DIOPT Version :10

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster


Alignment Length:535 Identity:173/535 - (32%)
Similarity:265/535 - (49%) Gaps:60/535 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILATILVFKGV------RIFNYIDHMAGIMEMIPGPTPYPFVGNLFQFGLKPAEYPKKVLQYCRK 67
            :|.:||:|..|      |:..||       |.||||...||:||..:..:...|...:|:...:.
  Fly    33 LLGSILIFLVVYNKRRSRLVKYI-------EKIPGPAAMPFLGNAIEMNVDHDELFNRVIGMQKL 90

  Fly    68 YD--------FQGFRSLVFLQYHMMLSDPAEIQNILSSSSLLYKEHLYSFLRPWLGDGLLTSSGA 124
            :.        :||....|      :|.:|..::.||:|...:.|.|.|.:|.||||:|||||:..
  Fly    91 WGTRIGINRVWQGTAPRV------LLFEPETVEPILNSQKFVNKSHDYDYLHPWLGEGLLTSTDR 149

  Fly   125 RWLKHQKLYAPAFERSAIEGYLRVVHRTGGQFVQKLDVLSDTQEVFDAQELVAKCTLDIVCENAT 189
            :|...:|:..|||....::.::.|.:.......:||.| ....|.|:....|..||||||||.|.
  Fly   150 KWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAV-EVGSEAFNLFPYVTLCTLDIVCETAM 213

  Fly   190 GQDSSSLNGETSDLHGAIKDLCDVVQERTFSIVKRFDALFRLTSYYMKQRRALSLLRSELNRIIS 254
            |:...:.:...|:...|:..:..:||.|...|..:.|.:|.||:.|...:..::.|....|.:|.
  Fly   214 GRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYINTLHGFSNMVIR 278

  Fly   255 QRRHQLAAENTCQQGQPINKP-------------FLDVLLTAKLDGKVLKEREIIEEVSTFIFTG 306
            :|:.:||...........|.|             |||:|:.|..:|.||...:|.|||.||:|.|
  Fly   279 ERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASKEGTVLSNEDIREEVDTFMFEG 343

  Fly   307 HDPIAAAISFTLYTLSRHSEIQQKAAEEQRRIFGENFAGEADLARLDQMHYLELIIRETLRLYPS 371
            ||..:||||:||:.|..|.|.|::..||...|||::....|.:..|..|.|||..|:::|||:||
  Fly   344 HDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPS 408

  Fly   372 VPLIARTNRNPIDINGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERFENPTGNVGIEAFKSV 436
            ||::||.....::|.|..|...|..|:...|:..|.:.|..|..|.|:.| .|....|...|..:
  Fly   409 VPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNF-LPENCAGRHPFAYI 472

  Fly   437 PFSAGPRRCIAEKFAMYQMKALLSQLLRRFEILPAVDGLPPGINDHSREDCVPQSEYDPVLNIRV 501
            |||||||.||.:|||:.:.||::|.:||:::| .|||         .|||.....|        :
  Fly   473 PFSAGPRNCIGQKFAILEEKAVISTVLRKYKI-EAVD---------RREDLTLLGE--------L 519

  Fly   502 TLKSENGIQIRLRKR 516
            .|:.::|:::::..|
  Fly   520 ILRPKDGLRVKITPR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 CYP4 73..511 CDD:410721 151/450 (34%)
Cyp4c3NP_524598.1 CYP4V-like 96..529 CDD:410753 153/458 (33%)

Return to query results.
Submit another query.