DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ad1 and cyp-25A3

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001040850.1 Gene:cyp-25A3 / 4363046 WormBaseID:WBGene00014697 Length:502 Species:Caenorhabditis elegans


Alignment Length:524 Identity:123/524 - (23%)
Similarity:206/524 - (39%) Gaps:108/524 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IPGPTPYPFVGNLFQFGLKPAEYPKKVLQYCRKYDF---------QGFRSLVFLQYHMMLSDPAE 90
            :.||.|:..:|||.|...:.|:     |.|...||:         :.|......|.::.:::..:
 Worm    36 LSGPEPHWLMGNLKQIIERKAK-----LGYDDSYDWYNKLHKQFGETFGIYFGTQLNINITNEED 95

  Fly    91 IQNILSSSSLLYKEHLYSFLRPWLGDGLLTSS------GARWLKHQKLYAPAFERSAIEGYLRVV 149
            |:.:...:...:.:....   |.:.|..|..|      .:.|...:...||.|....::.....:
 Worm    96 IKEVFIKNFSNFSDRTPP---PIIEDNKLKESLLQNTYESGWKHTRSAIAPIFSTGKMKAMHETI 157

  Fly   150 HRTGGQFVQKLDVLSDTQEVFDAQELVAKCTLDIVCENATGQDSSSLNGETSDLHGAIKDLCDV- 213
            |.....|::.|...:.:.:.:|..:.....|||::.:.|...||:           ..:|..|| 
 Worm   158 HSKVDLFLEILKEKASSGQKWDIYDDFQGLTLDVIGKCAFAIDSN-----------CQRDRNDVF 211

  Fly   214 -VQERTF-------------------SIVKRFDALFRLTSYYMKQRRALSLLRSE------LNRI 252
             |..|.|                   .:.|.:..|:|.|          .|.::|      |..:
 Worm   212 YVNARKFITNIDIRHSKIISTSFLFPELSKLWKVLYRFT----------DLAKAEIPLVEGLADV 266

  Fly   253 ISQRRHQLAAENTCQQGQPINKPFLDVLLTAKLD-GKVLKEREIIEEVSTFIFTGHDPIAAAISF 316
            ..:||....:::.         ..|.:||..:.| .|.:.::|:||....|:..|::..:.|:::
 Worm   267 YERRRGGEGSDSV---------DLLKLLLNREDDKSKPMTKQEVIENCFAFLLAGYETTSTAMTY 322

  Fly   317 TLYTLSRHSEIQQKAAEEQRRIFGENFAGEADLARLDQMHYLELIIRETLRLYPSVPLIARTNR- 380
            ..|.||::..:|||..||   |......|......:..|.||:.:.:||||.||  |:|..:|| 
 Worm   323 CSYLLSKYPNVQQKLYEE---IMEAKENGGLTYDSIHNMKYLDYVYKETLRCYP--PVIHFSNRR 382

  Fly   381 --NPIDINGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERFENPTGNVGIEAFKSVPFSAGPR 443
              ..|.|.|....|...|:.....:..|.:.:|.|..|.||||||  ......:.|.:||..|||
 Worm   383 CLKDITIRGQFYPKGAIVVCLPHTVHRNPENWDSPEEFHPERFEN--WEEKSSSLKWIPFGVGPR 445

  Fly   444 RCIAEKFAMYQMKALLSQLLRRFEILP---AVDGLPPGINDHSREDC--VPQSEYDPVLNIRVTL 503
            .|:..:||..:.|..:::||..||:..   ..|.:|         ||  |.....|||   |:.|
 Worm   446 YCVGMRFAEMEFKTTIAKLLDTFELKQFEGEADLIP---------DCNGVIMRPKDPV---RLHL 498

  Fly   504 KSEN 507
            |..|
 Worm   499 KPRN 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 111/479 (23%)
cyp-25A3NP_001040850.1 p450 37..496 CDD:278495 119/515 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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