DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ad1 and cyp46a1.4

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:XP_005160404.1 Gene:cyp46a1.4 / 393451 ZFINID:ZDB-GENE-040426-1224 Length:501 Species:Danio rerio


Alignment Length:518 Identity:131/518 - (25%)
Similarity:223/518 - (43%) Gaps:71/518 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 YIDHMAGIMEMIPGPTPYPFVGNLFQFGLKPAEYPKKV-----------LQYCRKY-DFQGFRSL 76
            ||.::....:.||||.     .:.|.||..|: ..|.:           ||:..|| ......||
Zfish    27 YIHYVHQKYDHIPGPP-----RDNFLFGHSPS-LTKSMYADDSLIHDLFLQWAEKYGPVYRINSL 85

  Fly    77 VFLQYHMMLSDPAEIQNILSS-----SSLLYKEHLYSFLRPWLGDGLLTS-SGARWLKHQKLYAP 135
            .::.  :::..|...:.||.|     ...:|:.....|.:.:||.||:|: ....|.:.:::..|
Zfish    86 HYIA--IVVHCPEATKTILMSPKYTKDPFVYRRLFNLFGKRFLGYGLITAVDHDIWYRQRRIMDP 148

  Fly   136 AFERSAIEGYLRVVHRTGGQFVQKLDVLSDTQEVFDAQELVAKCTLDIVCENATGQDSSSLNGET 200
            ||..|.:...:........:.:.||:.:::.:......:||...|||::|:.|.|.|.:.|..:.
Zfish   149 AFSSSYLRSLISTFDEMSERLMDKLEEMANNKTPAVMHDLVNCVTLDVICKVAFGVDLNFLAQKD 213

  Fly   201 SDLHGAIKDLCDVVQERTFSIVKRFDALFRLTSYYMKQ-RRALSLLRSELNRIISQRRHQLAAEN 264
            |....|: :||  :...|..:...|..||......:.| |.|..|||....:.|..|:  .|.:|
Zfish   214 SPFQNAV-ELC--LNGMTVDLRDPFFRLFPKNWKLIHQIRDAAELLRKTGEKWIQNRK--TAVKN 273

  Fly   265 TCQQGQPINKPFLDVLLTAKLDGKVLKE---REIIEEVSTFIFTGHDPIAAAISFTLYTLSRHSE 326
                |:.:.|..|..:|.:..:..|...   .::::...||...|.:..|..:||.:..|.|:.|
Zfish   274 ----GEDVPKDILTQILKSAEEENVNNTDDLEQMLDNFVTFFIAGQETTANQLSFAIMALGRNPE 334

  Fly   327 IQQKAAEEQRRIFGENFAGEADLARLDQMHYLELIIRETLRLYPSVPLIARTNRNPIDINGTKVA 391
            |.::|..|...:.|..  .|.....|.:..||..:::|||||||:.|...|.....:.|||.|:.
Zfish   335 IYKRAKAEVDEVLGTK--REISNEDLGKFTYLSQVLKETLRLYPTAPGTNRWLHEDMVINGIKIP 397

  Fly   392 KCTTVIMCLIAMGYNEKYFDDPCTFRPERFENPTGNVGIEAFKS----VPFSAGPRRCIAEKFAM 452
            ...:|:.........||:|.||..|.||||:       :.|.|.    .||:.|||.|:.:.|:.
Zfish   398 GGCSVMFSSYVSQRLEKFFKDPLKFDPERFD-------VNAPKPYYCYFPFALGPRTCLGQVFSQ 455

  Fly   453 YQMKALLSQLLRRFEILPAVDGLPPGINDHSREDCVPQSEYDPVLNIRVTLKSENGIQIRLRK 515
            .:.|.:|::||:|||.                 ..||...:|  :....||:.::|:...:::
Zfish   456 MEAKVVLAKLLQRFEF-----------------SLVPGQSFD--IKDTGTLRPKSGVICNIKQ 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 122/459 (27%)
cyp46a1.4XP_005160404.1 p450 39..495 CDD:278495 128/500 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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