DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ad1 and cyp46a1.2

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:XP_009292815.1 Gene:cyp46a1.2 / 393433 ZFINID:ZDB-GENE-040426-1184 Length:501 Species:Danio rerio


Alignment Length:522 Identity:135/522 - (25%)
Similarity:222/522 - (42%) Gaps:79/522 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 YIDHMAGIMEMIPGPTPYPFVGNLFQFGLKP----AEYPKK------VLQYCRKYDFQGFRSLVF 78
            ||.|:....:.||||.     .:.|..|..|    |.|...      .||:..||. ..:|....
Zfish    27 YIHHLHQKYDHIPGPP-----RDNFLLGHSPSLTKAMYSDDSLIHDLFLQWAEKYG-PVYRINTL 85

  Fly    79 LQYHMMLSDPAEIQNILSSSSLLYKEHLYS-----FLRPWLGDGLLTS-SGARWLKHQKLYAPAF 137
            ....:::..|...:.||.|.........||     |.:.:||:||:|: ....|.:.:::..|||
Zfish    86 HYIAILVHCPEATKTILMSPKYAKDPFSYSRLFNLFGKRFLGNGLVTAVDHDIWYRQRRIMDPAF 150

  Fly   138 ERSAIEGYLRVVHRTGGQFVQKLDVLSDTQEVFDAQELVAKCTLDIVCENATGQDSSSLNGETSD 202
            ..|.:...:........:.:.||:.:::.:......:||...|||::|:.|.|.|.:.|..:.|.
Zfish   151 SSSYLRSLISTFDEMSERLMDKLEEMANNKTPAVMHDLVNCVTLDVICKVAFGVDLNFLTQKDSP 215

  Fly   203 LHGAIKDLCDVVQERTFSIVKRFDALFRLTSYYMKQ----RRALSLLRSELNRIISQRRHQLAAE 263
            ...|| :||    ....::..| |.|||:.....|.    |.|..|||....:.|..|:  .|.:
Zfish   216 FQNAI-ELC----LNGMALDAR-DPLFRIFPKNWKLIQQIRDAAVLLRKTGEKWIQNRK--TAVK 272

  Fly   264 NTCQQGQPINKPFLDVLLTAKLDGKVLKE---------REIIEEVSTFIFTGHDPIAAAISFTLY 319
            |    |:.:.|..|..:|      |:.:|         .::::...||...|.:..|..:||.:.
Zfish   273 N----GEDVPKDILTQIL------KIAEEENVNSSEDLEQMMDNFVTFFIAGQETTANQLSFAIM 327

  Fly   320 TLSRHSEIQQKAAEEQRRIFG-ENFAGEADLARLDQMHYLELIIRETLRLYPSVPLIARTNRNPI 383
            .|.|:.||.::|..|...:.| :......||.:|.   ||..:::|||||||:.|...|.....:
Zfish   328 ALGRNPEIYKRAKAEVDEVLGTKREISNEDLGKLT---YLSQVLKETLRLYPTAPGTNRWLHEDM 389

  Fly   384 DINGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERFENPTGNVGIEAFKSVPFSAGPRRCIAE 448
            .|||.|:....:|:.........||:|.||..|.||||:.   |.....:...||:.|||.|:.:
Zfish   390 IINGIKIPGGCSVMFSSFVSQRLEKFFKDPLKFDPERFDE---NAPKPYYCYYPFALGPRTCLGQ 451

  Fly   449 KFAMYQMKALLSQLLRRFEILPAVDGLPPGINDHSREDCVPQSEYDPVLNIRVTLKSENGIQIRL 513
            .|:..:.|.:|::||:|||.                 ..||...:|  :....||:.::|:...:
Zfish   452 VFSQMEAKVVLAKLLQRFEF-----------------SLVPGQSFD--IKDTGTLRPKSGVICNI 497

  Fly   514 RK 515
            ::
Zfish   498 KQ 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 125/463 (27%)
cyp46a1.2XP_009292815.1 p450 39..495 CDD:278495 131/504 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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