DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ad1 and Cyp3a44

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_796354.1 Gene:Cyp3a44 / 337924 MGIID:2449818 Length:504 Species:Mus musculus


Alignment Length:499 Identity:120/499 - (24%)
Similarity:225/499 - (45%) Gaps:73/499 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIAIAIILATILVFKGVRIFNYIDHMAGIMEM--IPGPTPYPFVGNLFQFGLKPAEYP---KKVL 62
            |:.:||||        |.::.|.....|:.:.  ||||.|.||:|.:..:      |.   |..:
Mouse    12 LVLLAIIL--------VLLYRYGTRTHGLFKKQGIPGPKPLPFLGTVLNY------YTGIWKFDM 62

  Fly    63 QYCRKYD-----FQGFRSLVFLQYHMMLSDPAEIQNILSSSSLLYKEHLYSFLRPWLGDGLLT-- 120
            :...||.     |.|...|      ::::||..|:|:|....|    .:::..|.:...|:::  
Mouse    63 ECYEKYGKTWGLFDGQTPL------LVITDPETIKNVLVKDCL----SVFTNRREFGPVGIMSKA 117

  Fly   121 ---SSGARWLKHQKLYAPAFERSAIEGYLRVVHRTGGQFVQKLDVLSDTQEVFDAQELVAKCTLD 182
               |....|.:::.|.:|.|....::....|:.:.|...|:.|...::.......::::...::|
Mouse   118 ISISKDEEWKRYRALLSPTFTSGRLKEMFPVIEQYGDILVKYLRQEAEKGMPVAMKDVLGAYSMD 182

  Fly   183 IVCENATGQDSSSLNG-ETSDLHGAIKDL-CDVVQERTFSIV--KRFDALFRLTSYYMKQRRALS 243
            ::...:.|.:..|||. |...:..|.|.| .|......||:|  .....::.:.:..|....::.
Mouse   183 VITSTSFGVNVDSLNNPEDPFVEEAKKFLRVDFFDPLLFSVVLFPLLTPVYEMLNICMFPNDSIE 247

  Fly   244 LL-----RSELNRIISQRRHQLAAENTCQQGQPINKPFLDVLLTA------KLDGKVLKEREIIE 297
            ..     |.:.:|:.|.::|::              .||.:::.:      |...|.....||..
Mouse   248 FFKKFVDRMQESRLDSNQKHRV--------------DFLQLMMNSHNNSKDKDSHKAFSNMEITV 298

  Fly   298 EVSTFIFTGHDPIAAAISFTLYTLSRHSEIQQKAAEEQRRIFGENFAGEADLARLDQMHYLELII 362
            :...||..|::..::.:|||||.|:.|.:||:|...|..:..........|...  :|.||::::
Mouse   299 QSIIFISAGYETTSSTLSFTLYCLATHPDIQKKLQAEIDKALPNKATPTCDTVM--EMEYLDMVL 361

  Fly   363 RETLRLYPSVPLIARTNRNPIDINGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERFENPTGN 427
            .|||||||.|..:.|..:..:::||..:.|.:.|::...|:.::.:::.||..|:||||...  |
Mouse   362 NETLRLYPIVTRLERVCKKDVELNGVYIPKGSMVMIPSYALHHDPQHWPDPEEFQPERFSKE--N 424

  Fly   428 VG-IEAFKSVPFSAGPRRCIAEKFAMYQMKALLSQLLRRFEILP 470
            .| |:.:..:||..|||.||..:||:..||..::::|:.|...|
Mouse   425 KGSIDPYVYLPFGIGPRNCIGMRFALMNMKLAVTKVLQNFSFQP 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 110/462 (24%)
Cyp3a44NP_796354.1 p450 39..494 CDD:278495 111/464 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.