DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ad1 and Cyp4f18

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001028858.2 Gene:Cyp4f18 / 290623 RGDID:1305261 Length:524 Species:Rattus norvegicus


Alignment Length:545 Identity:145/545 - (26%)
Similarity:248/545 - (45%) Gaps:82/545 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLIAIAIILATILVFKGVRIFNYIDHMAGIMEMIPGPTPYPFVGNLFQFGLKPAEYPKKVLQYC 65
            :.|:..:.:||.||    .:::...::...:......||.....|:|   ||  .:..::.|.|.
  Rat    22 LLLVGASCLLAYIL----PQVYAVFENSRRLRRFPQPPTRNWLFGHL---GL--IQSSEEGLLYI 77

  Fly    66 RKYDFQGFRSL----------VFLQYHMMLSDPAEIQNILSSSSLLYKEHL-YSFLRPWLGDGLL 119
            :... :.||.:          |...:|.....|.    ||:.:|:..|:.: |.||:||||||||
  Rat    78 QSLS-RTFRDVCCWWVGPWHPVIRIFHPAFIKPV----ILAPASVAPKDRVFYRFLKPWLGDGLL 137

  Fly   120 TSSGARWLKHQKLYAPAFERSAIEGYLRVVH-----------RTGGQFVQKLDVLSDTQEVFDAQ 173
            .|:|.:|.:|:.:..|||..:.::.|:::.:           |...|...:||:.          
  Rat   138 LSTGDKWSRHRHMLTPAFHFNILKPYVKIFNDSTNIMHAKWQRLASQGSARLDMF---------- 192

  Fly   174 ELVAKCTLDIVCENATGQDSSSLNGETSDLHGAIKDLCDVVQERTFSIVKRFDALFRLTSYYMKQ 238
            |.::..|||.: :.......|:...:.|:...||.:|..:|..|..|::...|..:.||...|:.
  Rat   193 EHISLMTLDSL-QKCVFSFDSNCQEKPSEYITAILELSALVARRHQSLLLYVDLFYHLTRDGMRF 256

  Fly   239 RRALSLLRSELNRIISQRRHQLAAENTCQQGQPINK--------PFLDVLLTAKLD-GKVLKERE 294
            |:|..|:....:.:|.:||..|..    |.|....|        .|:||||.:|.: |:.|.:.:
  Rat   257 RKACRLVHDFTDAVIRERRRTLPD----QGGDDALKAKAKAKTLDFIDVLLLSKDEHGEALSDED 317

  Fly   295 IIEEVSTFIFTGHDPIAAAISFTLYTLSRHSEIQQKAAEEQRRIFGENFAGEADLARLDQMHYLE 359
            |..|..||:|.|||..|:.:|:.||.|::|.|.|::..:|.|.:..:....|.:...|.|:.:|.
  Rat   318 IRAEADTFMFGGHDTTASGLSWILYNLAKHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLT 382

  Fly   360 LIIRETLRLYPSVPLIARTNRNPIDI-NGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERFEN 423
            :.|:|:|||:|....|:|.....|.: :|..:.|.....:.:....:|...:.||..:.|.||:.
  Rat   383 MCIKESLRLHPPATAISRCCTQDIMLPDGRVIPKGVICRISIFGTHHNPAVWPDPEVYNPFRFDA 447

  Fly   424 PTGNVGIEAFKSVPFSAGPRRCIAEKFAMYQMKALLSQLLRRFEILPAVDGLPPGINDHSREDCV 488
            ..|. |......:|||||||.||.:.|||.:||..|:..|.||.:||                  
  Rat   448 DNGE-GRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRVLP------------------ 493

  Fly   489 PQSEYDPVLNIRVTLKSENGIQIRL 513
              .:.:|.....:.|::|.|:.:|:
  Rat   494 --DDKEPRRKPELILRAEGGLWLRV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 133/465 (29%)
Cyp4f18NP_001028858.2 CYP4F 74..515 CDD:410772 133/481 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348652
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.650

Return to query results.
Submit another query.